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1by de Greef, Evelien, Einfeldt, Anthony, Miller, Patrick, Ferguson, Steve, Garroway, Colin, Lefort, Kyle, Paterson, Ian, Bentzen, Paul, Feyrer, Laura“... scaffold length 50kb NBW_SNPS_filtered_pruned_population_analyses.vcf.gz - Additionally LD-pruned with r2...”
Published 2021
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2by de Greef, Evelien, Einfeldt, Anthony, Miller, Patrick, Ferguson, Steve, Garroway, Colin, Lefort, Kyle, Paterson, Ian, Bentzen, Paul, Feyrer, Laura“... scaffold length 50kb NBW_SNPS_filtered_pruned_population_analyses.vcf.gz - Additionally LD-pruned with r2...”
Published 2021
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3by de Greef, Evelien, Einfeldt, Anthony, Miller, Patrick, Ferguson, Steve, Garroway, Colin, Lefort, Kyle, Paterson, Ian, Bentzen, Paul, Feyrer, Laura“... scaffold length 50kb, and sites in Hardy-Weinberg Equilibrium...”
Published 2022
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4by de Greef, Evelien, Einfeldt, Anthony, Miller, Patrick, Ferguson, Steve, Garroway, Colin, Lefort, Kyle, Paterson, Ian, Bentzen, Paul, Feyrer, Laura“..., missingness > 0.4), non-biallelic sites, autosomes, structural variants, minimum scaffold length 100kb...”
Published 2021
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5by Marques, João Pedro, Seixas, Fernando A., Good, Jeffrey M., Farelo, Liliana, Callahan, Colin M., Montgomery, W. Ian, Reid, Neil, Alves, Paulo C., Boursot, Pierre, Melo-Ferreira, José“... sequencing (77x coverage). The assembly contained 32,294 scaffolds with a total length of 2.7 Gb and a...”
Published 2020
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6“...The article explains how to modify scaffold holes in order not to let pigeons (Columba livia...”
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Book Part -
7by Giunta, Carolina I, Nazemi, Seyed Amirabbas, Olesinska, Magdalena, Shahgaldian, Patrick“... a silica scaffold, and shielded within a nanometre-thin organosilica layer. To produce such a hybrid...”
Published in Nanoscale Advances (2022)
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Article in Journal/Newspaper -
8by Bidon, Tobias, Janke, Axel, Fain, Steven R., Eiken, Hans Geir, Hagen, Snorre B., Saarma, Urmas, Hallström, Björn M., Lecomte, Nicolas, Hailer, Frank“...-chromosomal scaffold using sequencing data from published male ursine genomes. Y chromosome evidence support...”
Published 2015
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9by Zorn, Katja, Oroz-Guinea, Isabel, Brundiek, Henrike, Dörr, Mark, Bornscheuer, Uwe T.“... entailed several steps, including: (i) the choice of a suitable lipase scaffold to serve as a protein...”
Published in Advanced Synthesis & Catalysis (2018)
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Article in Journal/Newspaper -
10“...). Scaffold 5.1.2 (Proteome Software) was used for protein grouping and exclusive spectral counting. Note...”
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Dataset -
11“...). Scaffold 5.1.2 (Proteome Software) was used for protein grouping and exclusive spectral counting. Note...”
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12“..., to ensure independence of SNPs.split_scaffold_burbot_ref_long_94Because there are no existing genomic...”
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Dataset -
13by Humble, E., Martinez-Barrio, A., Forcada, J., Trathan, P.N., Thorne, M.A.S., Hoffmann, M., Wolf, J. B. W., Hoffman, J.I., Hoffman, J. I., Trathan, P. N., Thorne, M. A. S.“... seal (Arctocephalus gazella) genome (assembly size: 2.41Gb; scaffold/contig N50: 3.1Mb/27.5kb). We...”
Published 2015
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14by Emerling, Christopher A., Springer, Mark S., Gatesy, John, Jones, Zachary, Hamilton, Deana, Xia-Zhu, David, Collin, Matthew A., Delsuc, Frédéric“... accession number indicates coordinates for sequence on the contig / scaffold. Exon colors code...”
Published 2021
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Dataset -
15by Winter, Sven, de Raad, Jordi, Wolf, Magnus, Coimbra, Raphael T. F., de Jong, Menno J., Schöneberg, Yannis, Christoph, Maria, von Klopotek, Hagen, Bach, Katharina, Pashm Foroush, Behgol, Hanack, Wiebke, Kauffeldt, Aaron Hagen, Milz, Tim, Ngetich, Emmanuel Kipruto, Wenz, Christian, Sonnewald, Moritz, Nilsson, Maria A., Janke, Axel“... of 808.5 Mbp, of which 97.1% were anchored into 24 chromosome-scale scaffolds using proximity-ligation...”
Published 2023
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16by Malmstrøm, Martin, Matschiner, Michael, Tørresen, Ole K., Star, Bastiaan, Snipen, Lars G., Hansen, Thomas F., Baalsrud, Helle T., Nederbragt, Alexander J., Hanel, Reinhold, Salzburger, Walter, Stenseth, Nils C., Jakobsen, Kjetill S., Jentoft, Sissel“.... Assembled scaffolds for Arctogadus glacialisfish_1.scf.fasta.gzAssembled unitigs for Arctogadus...”
Published 2017
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17by Doyle, Jacqueline M., Katzner, Todd E., Bloom, Peter H., Ji, Yanzhu, Wijayawardena, Bhagya K., DeWoody, J. Andrew“... and assembled the high-quality data to a depth of ~40x coverage. The genome assembly includes 2,552 scaffolds...”
Published 2015
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Dataset -
18by de Greef, Evelien, Einfeldt, Anthony, Miller, Patrick, Ferguson, Steve, Garroway, Colin, Lefort, Kyle, Paterson, Ian, Bentzen, Paul, Feyrer, Laura“... SNPs from scaffolds with a minimum of 100kb (max-missing 0.4), and filtered & imputed SNPs from...”
Published 2021
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19by Autenrieth, Marijke, Hartmann, Stefanie, Lah, Ljerka, Roos, Anna, Dennis, Alice B., Tiedemann, Ralph“...% of the total length found in just 34 scaffolds. Using just 122 of the longest scaffolds, we were able to show...”
Published 2018
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20by Sun, Jin, Zhang, Yu, Xu, Ting, Zhang, Yang, Mu, Huawei, Zhang, Yanjie, Lan, Yi, Fields, Christopher J., Hui, Jerome H. L., Zhang, Wei-Peng, Li, Runsheng, Nong, Wenyan, Cheung, Fiona K. M., Qiu, Jian-Wen, Qian, Pei-Yuan“... of symbiosis in other organisms such as deep-sea tubeworms and giant clams. The assembled genomic scaffolds...”
Published 2017
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Dataset