Modern planktonic Foraminifera: migrate or perish

• Main Authors: Sonia Chaabane, Thibault de Garidel, Julie Meilland, Olivier Sulpis, Thomas B. Chalk, Geert-Jan Brummer, Graham P. Mortyn, Xavier Giraud, Nicolas Casajus, Azumi Kuroyanagi, Gregory Beaugrand, Ralf Schiebel
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: 2023
• Subjects: Planktonic Foraminifera; Ocean acidification; Vertical and lateral migrations; Ocean warming; ecosystem collapse; biodiversity shifts; Environmental niche adaptation; Planktonic foraminifera
• Online Access: https://zenodo.org/record/8409865; https://doi.org/10.5281/zenodo.8409865

Data and R code for "Modern planktonic Foraminifera: migrate or perish" by Sonia Chaabane, Thibault de Garidel-Thoron, Julie Meilland, Olivier Sulpis, Thomas B. Chalk, Geert-Jan A. Brummer, P. Graham Mortyn, Xavier Giraud, Hélène Howa, Nicolas Casajus, Azumi Kuroyanagi, Gregory Beaugrand, Ralf Schiebel The provided scripts are for generating specific figures and analyses presented in the paper “Modern planktonic Foraminifera: migrate or perish”. These scripts examine the temporal and spatial variations, diversity shifts, and number concentrations of planktonic Foraminifera across the global oceans. Scripts written by Sonia Chaabane DATA SOURCES * FORCIS database: https://doi.org/10.5281/zenodo.7390791 * ForCenS database: https://doi.pangaea.de/10.1594/PANGAEA.873570 Codes to harmonize the number concentration data were sourced from https://zenodo.org/record/7437720 CODES 1. Figure_1A_Diversity_Changes_Global_Map_Analysis: Creates a global map overlay showcasing planktonic Foraminifera species diversity. 2. Figure_1B_Diversity_Changes: Compares pre-industrial and modern-day planktonic Foraminifera diversity. 3. Figure_2A_B_Vertical_Distribution_Analysis: Investigates depth preferences of planktonic Foraminifera and their changes over time. 4. Figure_3_Temporal_Variations_Planktonic_Foraminifera: Generates heat maps to visualize temporal variations in planktonic Foraminifera concentration across specified latitudinal bands. 5. Extended_Data_Figure_1_Time_Series_Visualization_FORCIS: Visualizes the geographical distribution of FORCIS data through the decades. 6. Extended_Data_Figure_2_Number_Concentration_Analysis: Examines latitudinal variations in planktonic Foraminifera number concentrations in specific oceans. 7. Extended_Data_Figure_3_Diversity_Comparison_Global_Map: Maps species diversity disparities between the FORCIS and ForCenS databases. 8. Extended_Data_Figure_4_Geographic_Distribution_Species: Illustrates global distribution patterns of specific planktonic Foraminifera species. 9. ...