Wild pedigrees inform mutation rates and historic abundance in baleen whales

Phylogeny-based estimates suggesting a low germline mutation rate (μ) in baleen whales have influenced research ranging from assessments of whaling impacts to evolutionary cancer biology. We estimated μ directly from pedigrees in four baleen whale species for both the mitochondrial control region an...

Full description

Bibliographic Details
Main Authors: Suárez-Menéndez, Marcos, Bérubé, Martine, Furni, Fabrício, Rivera-Leon, Vania, Heide-Jørgensen, Mads Peter, Larsen, Finn, Sears, Richard, Ramp, Christian, Eriksson, Britas Klemens, Etienne, Rampal, Robbins, Jooke, Palsbøll, Per
Format: Dataset
Language:unknown
Published: 2023
Subjects:
Online Access:https://zenodo.org/record/8306163
https://doi.org/10.5061/dryad.9kd51c5pq
id ftzenodo:oai:zenodo.org:8306163
record_format openpolar
spelling ftzenodo:oai:zenodo.org:8306163 2023-10-01T03:54:54+02:00 Wild pedigrees inform mutation rates and historic abundance in baleen whales Suárez-Menéndez, Marcos Bérubé, Martine Furni, Fabrício Rivera-Leon, Vania Heide-Jørgensen, Mads Peter Larsen, Finn Sears, Richard Ramp, Christian Eriksson, Britas Klemens Etienne, Rampal Robbins, Jooke Palsbøll, Per 2023-08-31 https://zenodo.org/record/8306163 https://doi.org/10.5061/dryad.9kd51c5pq unknown doi:10.1101/2022.10.06.510775 https://zenodo.org/communities/dryad https://zenodo.org/record/8306163 https://doi.org/10.5061/dryad.9kd51c5pq oai:zenodo.org:8306163 info:eu-repo/semantics/openAccess https://creativecommons.org/publicdomain/zero/1.0/legalcode pedigree baleen whales mutation rate info:eu-repo/semantics/other dataset 2023 ftzenodo https://doi.org/10.5061/dryad.9kd51c5pq10.1101/2022.10.06.510775 2023-09-05T22:58:56Z Phylogeny-based estimates suggesting a low germline mutation rate (μ) in baleen whales have influenced research ranging from assessments of whaling impacts to evolutionary cancer biology. We estimated μ directly from pedigrees in four baleen whale species for both the mitochondrial control region and nuclear genome. The results suggest values higher than those obtained through phylogeny-based estimates and similar to pedigree-based values for primates and toothed whales. Applying our estimate of μ reduces previous genetic–based estimates of pre-exploitation whale abundance by 86% and suggests that μ cannot explain low cancer rates in gigantic mammals. Our study shows that it is feasible to estimate μ directly from pedigrees in natural populations, with wide-ranging implications for ecological and evolutionary research. Funding provided by: H2020 Marie Skłodowska-Curie ActionsCrossref Funder Registry ID: http://dx.doi.org/10.13039/100010665Award Number: 813383Funding provided by: National Marine Fisheries ServiceCrossref Funder Registry ID: http://dx.doi.org/10.13039/100013408Award Number: Funding provided by: Rijksuniversiteit GroningenCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100001721Award Number: Funding provided by: Aage V. Jensens FondeCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100002721Award Number: Funding provided by: Consejo Nacional de Ciencia y TecnologíaCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100003141Award Number: Funding provided by: WWF VerdensnaturfondenCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100013939Award Number: Funding provided by: International Whaling Comission Scientific CommitteeAward Number: Funding provided by: Kommissionen for Videnskabelige Undersøgelser i GrønlandCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100004797Award Number: Funding provided by: Greenland Home RuleAward Number: Dataset baleen whale baleen whales Greenland toothed whales Zenodo Greenland
institution Open Polar
collection Zenodo
op_collection_id ftzenodo
language unknown
topic pedigree
baleen whales
mutation rate
spellingShingle pedigree
baleen whales
mutation rate
Suárez-Menéndez, Marcos
Bérubé, Martine
Furni, Fabrício
Rivera-Leon, Vania
Heide-Jørgensen, Mads Peter
Larsen, Finn
Sears, Richard
Ramp, Christian
Eriksson, Britas Klemens
Etienne, Rampal
Robbins, Jooke
Palsbøll, Per
Wild pedigrees inform mutation rates and historic abundance in baleen whales
topic_facet pedigree
baleen whales
mutation rate
description Phylogeny-based estimates suggesting a low germline mutation rate (μ) in baleen whales have influenced research ranging from assessments of whaling impacts to evolutionary cancer biology. We estimated μ directly from pedigrees in four baleen whale species for both the mitochondrial control region and nuclear genome. The results suggest values higher than those obtained through phylogeny-based estimates and similar to pedigree-based values for primates and toothed whales. Applying our estimate of μ reduces previous genetic–based estimates of pre-exploitation whale abundance by 86% and suggests that μ cannot explain low cancer rates in gigantic mammals. Our study shows that it is feasible to estimate μ directly from pedigrees in natural populations, with wide-ranging implications for ecological and evolutionary research. Funding provided by: H2020 Marie Skłodowska-Curie ActionsCrossref Funder Registry ID: http://dx.doi.org/10.13039/100010665Award Number: 813383Funding provided by: National Marine Fisheries ServiceCrossref Funder Registry ID: http://dx.doi.org/10.13039/100013408Award Number: Funding provided by: Rijksuniversiteit GroningenCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100001721Award Number: Funding provided by: Aage V. Jensens FondeCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100002721Award Number: Funding provided by: Consejo Nacional de Ciencia y TecnologíaCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100003141Award Number: Funding provided by: WWF VerdensnaturfondenCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100013939Award Number: Funding provided by: International Whaling Comission Scientific CommitteeAward Number: Funding provided by: Kommissionen for Videnskabelige Undersøgelser i GrønlandCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100004797Award Number: Funding provided by: Greenland Home RuleAward Number:
format Dataset
author Suárez-Menéndez, Marcos
Bérubé, Martine
Furni, Fabrício
Rivera-Leon, Vania
Heide-Jørgensen, Mads Peter
Larsen, Finn
Sears, Richard
Ramp, Christian
Eriksson, Britas Klemens
Etienne, Rampal
Robbins, Jooke
Palsbøll, Per
author_facet Suárez-Menéndez, Marcos
Bérubé, Martine
Furni, Fabrício
Rivera-Leon, Vania
Heide-Jørgensen, Mads Peter
Larsen, Finn
Sears, Richard
Ramp, Christian
Eriksson, Britas Klemens
Etienne, Rampal
Robbins, Jooke
Palsbøll, Per
author_sort Suárez-Menéndez, Marcos
title Wild pedigrees inform mutation rates and historic abundance in baleen whales
title_short Wild pedigrees inform mutation rates and historic abundance in baleen whales
title_full Wild pedigrees inform mutation rates and historic abundance in baleen whales
title_fullStr Wild pedigrees inform mutation rates and historic abundance in baleen whales
title_full_unstemmed Wild pedigrees inform mutation rates and historic abundance in baleen whales
title_sort wild pedigrees inform mutation rates and historic abundance in baleen whales
publishDate 2023
url https://zenodo.org/record/8306163
https://doi.org/10.5061/dryad.9kd51c5pq
geographic Greenland
geographic_facet Greenland
genre baleen whale
baleen whales
Greenland
toothed whales
genre_facet baleen whale
baleen whales
Greenland
toothed whales
op_relation doi:10.1101/2022.10.06.510775
https://zenodo.org/communities/dryad
https://zenodo.org/record/8306163
https://doi.org/10.5061/dryad.9kd51c5pq
oai:zenodo.org:8306163
op_rights info:eu-repo/semantics/openAccess
https://creativecommons.org/publicdomain/zero/1.0/legalcode
op_doi https://doi.org/10.5061/dryad.9kd51c5pq10.1101/2022.10.06.510775
_version_ 1778522930862358528