The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum

Cold shock proteins (Csp) are small acidic proteins that fold into β-barrel structures with five anti-parallel β-strands and are involved in essential cellular processes. Upon temperature downshift the synthesis of Csp proteins is drastically increased to enable cells to restore growth in the cold....

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Main Author: Giaquinto, Laura
Format: Doctoral or Postdoctoral Thesis
Language:English
Published: UNSW, Sydney 2006
Subjects:
Online Access:http://hdl.handle.net/1959.4/26148
https://unsworks.unsw.edu.au/bitstreams/c65e211f-7de0-4236-bf5c-17c117ea411f/download
https://doi.org/10.26190/unsworks/15956
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author Giaquinto, Laura
author_facet Giaquinto, Laura
author_sort Giaquinto, Laura
collection UNSW Sydney (The University of New South Wales): UNSWorks
description Cold shock proteins (Csp) are small acidic proteins that fold into β-barrel structures with five anti-parallel β-strands and are involved in essential cellular processes. Upon temperature downshift the synthesis of Csp proteins is drastically increased to enable cells to restore growth in the cold. These proteins facilitate transcription and translation at low temperature by functioning as RNA chaperones. Csp proteins have been most extensively studied in Bacteria but very few Csp homologues have been identified and studied in Archaea. This is the first study examining structural, functional and biophysical properties of Csp from the Antarctic archaeon Methanogenium frigidum. The fastidious growth requirements of M. frigidum make it difficult to cultivate, therefore recombinant methods have been developed for the expression and characterization of the protein. The analysis by transverse urea gradient gel electrophoresis (TUG-GE) revealed that M. frigidum Csp folds by a reversible two-state mechanism and has a low conformational stability. The spectroscopic analysis of the protein performed by Circular Dichroism (CD) spectroscopy disclosed features typical of other homologous proteins. A possible association between Csp and RNA has been proposed according to MALDI-TOF mass spectrometry analysis. The effect of a Nterminal polyhistidine affinity tag on the biophysical properties of Csp was also examined. The biological activity of Csp was investigated by complementation of an E. coli cold sensitive mutant. These studies revealed that the M. frigidum Csp is biologically active and can function in E. coli.
format Doctoral or Postdoctoral Thesis
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
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spelling ftunswworks:oai:unsworks.library.unsw.edu.au:1959.4/26148 2025-01-16T19:42:36+00:00 The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum Giaquinto, Laura 2006 application/pdf http://hdl.handle.net/1959.4/26148 https://unsworks.unsw.edu.au/bitstreams/c65e211f-7de0-4236-bf5c-17c117ea411f/download https://doi.org/10.26190/unsworks/15956 EN eng UNSW, Sydney http://hdl.handle.net/1959.4/26148 https://doi.org/10.26190/unsworks/15956 open access https://purl.org/coar/access_right/c_abf2 CC BY-NC-ND 3.0 https://creativecommons.org/licenses/by-nc-nd/3.0/au/ free_to_read Proteins Archaebacteria doctoral thesis http://purl.org/coar/resource_type/c_db06 2006 ftunswworks https://doi.org/10.26190/unsworks/15956 2024-10-22T16:16:57Z Cold shock proteins (Csp) are small acidic proteins that fold into β-barrel structures with five anti-parallel β-strands and are involved in essential cellular processes. Upon temperature downshift the synthesis of Csp proteins is drastically increased to enable cells to restore growth in the cold. These proteins facilitate transcription and translation at low temperature by functioning as RNA chaperones. Csp proteins have been most extensively studied in Bacteria but very few Csp homologues have been identified and studied in Archaea. This is the first study examining structural, functional and biophysical properties of Csp from the Antarctic archaeon Methanogenium frigidum. The fastidious growth requirements of M. frigidum make it difficult to cultivate, therefore recombinant methods have been developed for the expression and characterization of the protein. The analysis by transverse urea gradient gel electrophoresis (TUG-GE) revealed that M. frigidum Csp folds by a reversible two-state mechanism and has a low conformational stability. The spectroscopic analysis of the protein performed by Circular Dichroism (CD) spectroscopy disclosed features typical of other homologous proteins. A possible association between Csp and RNA has been proposed according to MALDI-TOF mass spectrometry analysis. The effect of a Nterminal polyhistidine affinity tag on the biophysical properties of Csp was also examined. The biological activity of Csp was investigated by complementation of an E. coli cold sensitive mutant. These studies revealed that the M. frigidum Csp is biologically active and can function in E. coli. Doctoral or Postdoctoral Thesis Antarc* Antarctic UNSW Sydney (The University of New South Wales): UNSWorks Antarctic The Antarctic
spellingShingle Proteins
Archaebacteria
Giaquinto, Laura
The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum
title The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum
title_full The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum
title_fullStr The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum
title_full_unstemmed The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum
title_short The characterization of Csp (Cold Shock Protein) from the Antarctic archaeon, Methanogenium frigidum
title_sort characterization of csp (cold shock protein) from the antarctic archaeon, methanogenium frigidum
topic Proteins
Archaebacteria
topic_facet Proteins
Archaebacteria
url http://hdl.handle.net/1959.4/26148
https://unsworks.unsw.edu.au/bitstreams/c65e211f-7de0-4236-bf5c-17c117ea411f/download
https://doi.org/10.26190/unsworks/15956