Using Phylogenetic Analysis to Detect Market Substitution of Atlantic Salmon for Pacific Salmon: an Introductory Biology Laboratory Experiment

We describe a laboratory exercise developed for the cell and molecular biology quarter of a year-long majors' undergraduate introductory biology sequence. In an analysis of salmon samples collected by students in their local stores and restaurants, DNA sequencing and phylogenetic analysis were...

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Bibliographic Details
Published in:The American Biology Teacher
Main Authors: Cline, Erica T., Gogarten, Jennifer
Format: Text
Language:unknown
Published: UW Tacoma Digital Commons 2012
Subjects:
Undergraduate Introductory Biology Education
Salmon Market Substitution
Phylogenetic Analysis
DNA Sequencing
Polybrominated Diphenyl Ethers
Global Assessment
Wild Salmon
Contaminants
Seafood
Marine Biology
Science and Mathematics Education
Pacific
Atlantic salmon
Online Access:https://digitalcommons.tacoma.uw.edu/ias_pub/17
https://doi.org/10.1525/abt.2012.74.4.7
https://digitalcommons.tacoma.uw.edu/context/ias_pub/article/1015/viewcontent/Cline_74.4.244.pdf
Description
Summary:We describe a laboratory exercise developed for the cell and molecular biology quarter of a year-long majors' undergraduate introductory biology sequence. In an analysis of salmon samples collected by students in their local stores and restaurants, DNA sequencing and phylogenetic analysis were used to detect market substitution of Atlantic salmon for Pacific salmon. This allowed students to apply molecular methods such as polymerase chain reaction (PCR) and DNA sequencing to a socially relevant issue.

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