Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait
Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity, bottom temperature, gear, date, cruise and station# and a collection number for every specimen (DFO Canada collections). N...
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Wageningen University & Research
2019
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Online Access: | https://research.wur.nl/en/datasets/collection-data-16s-microbiome-and-metabolome-of-geodia-barretti- https://doi.org/10.1594/pangaea.909246 |
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ftunivwagenin:oai:library.wur.nl:wurpubs/612070 2024-02-04T09:59:59+01:00 Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait Steffen, Karin Indraningrat, Anak Agung Gede Erngren, Ida Haglöf, Jakob Becking, Leontine E. Kenchington, Ellen Smidt, Hauke Yashayaev, Igor Pettersson, Curt Cárdenas, Paco Sipkema, Detmer 2019 text/html https://research.wur.nl/en/datasets/collection-data-16s-microbiome-and-metabolome-of-geodia-barretti- https://doi.org/10.1594/pangaea.909246 unknown Wageningen University & Research info:eu-repo/grantAgreement/EC/H2020/679849 https://edepot.wur.nl/589514 https://research.wur.nl/en/datasets/collection-data-16s-microbiome-and-metabolome-of-geodia-barretti- doi:10.1594/pangaea.909246 info:eu-repo/semantics/openAccess Wageningen University & Research Deep-sea Geodia barretti Stryphnus fortis Weberella bursa marine sponges metabolomics microbiome info:eu-repo/semantics/other info:eu-repo/semantics/publishedVersion 2019 ftunivwagenin https://doi.org/10.1594/pangaea.909246 2024-01-10T23:16:20Z Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity, bottom temperature, gear, date, cruise and station# and a collection number for every specimen (DFO Canada collections). NCBI SRA# of the 16S gene amplicon sequencing of their microbiome. Numbers of the UPLC-HRMS runs (four different modes for every specimen: HILIC+, HILIC-, RP+ and RP-). The raw UPLC-HRMS datasets are deposited in the repository metabolights (www.ebi.ac.uk/metabolights/MTBLS1388). QC runs are Quality Control runs for the UPLC-HRMS experiment (also deposited in metabolights). Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity, bottom temperature, gear, date, cruise and station# and a collection number for every specimen (DFO Canada collections). NCBI SRA# of the 16S gene amplicon sequencing of their microbiome. Numbers of the UPLC-HRMS runs (four different modes for every specimen: HILIC+, HILIC-, RP+ and RP-). The raw UPLC-HRMS datasets are deposited in the repository metabolights (www.ebi.ac.uk/metabolights/MTBLS1388). QC runs are Quality Control runs for the UPLC-HRMS experiment (also deposited in metabolights). Other/Unknown Material Davis Strait Wageningen UR (University & Research Centre): Digital Library Canada |
institution |
Open Polar |
collection |
Wageningen UR (University & Research Centre): Digital Library |
op_collection_id |
ftunivwagenin |
language |
unknown |
topic |
Deep-sea Geodia barretti Stryphnus fortis Weberella bursa marine sponges metabolomics microbiome |
spellingShingle |
Deep-sea Geodia barretti Stryphnus fortis Weberella bursa marine sponges metabolomics microbiome Steffen, Karin Indraningrat, Anak Agung Gede Erngren, Ida Haglöf, Jakob Becking, Leontine E. Kenchington, Ellen Smidt, Hauke Yashayaev, Igor Pettersson, Curt Cárdenas, Paco Sipkema, Detmer Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait |
topic_facet |
Deep-sea Geodia barretti Stryphnus fortis Weberella bursa marine sponges metabolomics microbiome |
description |
Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity, bottom temperature, gear, date, cruise and station# and a collection number for every specimen (DFO Canada collections). NCBI SRA# of the 16S gene amplicon sequencing of their microbiome. Numbers of the UPLC-HRMS runs (four different modes for every specimen: HILIC+, HILIC-, RP+ and RP-). The raw UPLC-HRMS datasets are deposited in the repository metabolights (www.ebi.ac.uk/metabolights/MTBLS1388). QC runs are Quality Control runs for the UPLC-HRMS experiment (also deposited in metabolights). Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity, bottom temperature, gear, date, cruise and station# and a collection number for every specimen (DFO Canada collections). NCBI SRA# of the 16S gene amplicon sequencing of their microbiome. Numbers of the UPLC-HRMS runs (four different modes for every specimen: HILIC+, HILIC-, RP+ and RP-). The raw UPLC-HRMS datasets are deposited in the repository metabolights (www.ebi.ac.uk/metabolights/MTBLS1388). QC runs are Quality Control runs for the UPLC-HRMS experiment (also deposited in metabolights). |
format |
Other/Unknown Material |
author |
Steffen, Karin Indraningrat, Anak Agung Gede Erngren, Ida Haglöf, Jakob Becking, Leontine E. Kenchington, Ellen Smidt, Hauke Yashayaev, Igor Pettersson, Curt Cárdenas, Paco Sipkema, Detmer |
author_facet |
Steffen, Karin Indraningrat, Anak Agung Gede Erngren, Ida Haglöf, Jakob Becking, Leontine E. Kenchington, Ellen Smidt, Hauke Yashayaev, Igor Pettersson, Curt Cárdenas, Paco Sipkema, Detmer |
author_sort |
Steffen, Karin |
title |
Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait |
title_short |
Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait |
title_full |
Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait |
title_fullStr |
Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait |
title_full_unstemmed |
Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait |
title_sort |
collection data, 16s microbiome and metabolome of geodia barretti, stryphnus fortis and weberella bursa, in the davis strait |
publisher |
Wageningen University & Research |
publishDate |
2019 |
url |
https://research.wur.nl/en/datasets/collection-data-16s-microbiome-and-metabolome-of-geodia-barretti- https://doi.org/10.1594/pangaea.909246 |
geographic |
Canada |
geographic_facet |
Canada |
genre |
Davis Strait |
genre_facet |
Davis Strait |
op_relation |
info:eu-repo/grantAgreement/EC/H2020/679849 https://edepot.wur.nl/589514 https://research.wur.nl/en/datasets/collection-data-16s-microbiome-and-metabolome-of-geodia-barretti- doi:10.1594/pangaea.909246 |
op_rights |
info:eu-repo/semantics/openAccess Wageningen University & Research |
op_doi |
https://doi.org/10.1594/pangaea.909246 |
_version_ |
1789965053214064640 |