Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae)

We characterized eight polymorphic microsatellites in the Scotia icefish Chaenocephalus aceratus (Perciformes, Notothenioidei, Channichthyidae) that is endemic of Southern Ocean waters surrounding the tip of the Antarctic Peninsula. Microsatellites were isolated from a partial genomic library enrich...

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Published in:Molecular Ecology Notes
Main Authors: SUSANA E, BORTOLOTTO E, BUCCOLI S, PAPETTI, CHIARA, BARBISAN, FEDERICA, PATARNELLO, TOMASO, ZANE, LORENZO
Other Authors: Susana, E, Papetti, Chiara, Barbisan, Federica, Bortolotto, E, Buccoli, S, Patarnello, Tomaso, Zane, Lorenzo
Format: Article in Journal/Newspaper
Language:English
Published: BBLACKWELL PUBLISHING, 9600 GARSINGTON RD, OXFORD OX4 2DQ, OXON, ENGLAND 2007
Subjects:
Online Access:http://hdl.handle.net/11577/1777336
https://doi.org/10.1111/j.1471-8286.2007.01703.x
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spelling ftunivpadovairis:oai:www.research.unipd.it:11577/1777336 2024-04-14T08:03:27+00:00 Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae) SUSANA E BORTOLOTTO E BUCCOLI S PAPETTI, CHIARA BARBISAN, FEDERICA PATARNELLO, TOMASO ZANE, LORENZO Susana, E Papetti, Chiara Barbisan, Federica Bortolotto, E Buccoli, S Patarnello, Tomaso Zane, Lorenzo 2007 STAMPA http://hdl.handle.net/11577/1777336 https://doi.org/10.1111/j.1471-8286.2007.01703.x eng eng BBLACKWELL PUBLISHING, 9600 GARSINGTON RD, OXFORD OX4 2DQ, OXON, ENGLAND info:eu-repo/semantics/altIdentifier/wos/WOS:000249193000014 volume:7 firstpage:791 lastpage:793 numberofpages:3 journal:MOLECULAR ECOLOGY NOTES http://hdl.handle.net/11577/1777336 doi:10.1111/j.1471-8286.2007.01703.x info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-34548230380 Microsatellite Genetic marker Antarctic fish info:eu-repo/semantics/article 2007 ftunivpadovairis https://doi.org/10.1111/j.1471-8286.2007.01703.x 2024-03-21T18:59:18Z We characterized eight polymorphic microsatellites in the Scotia icefish Chaenocephalus aceratus (Perciformes, Notothenioidei, Channichthyidae) that is endemic of Southern Ocean waters surrounding the tip of the Antarctic Peninsula. Microsatellites were isolated from a partial genomic library enriched for an AC motif. The number of alleles ranged from two to 19 with a mean observed hererozygosity of 0.71. Loci were in Hardy–Weinberg equilibrium and no evidence for linkage disequilibrium was found. These molecular markers will be useful to investigate Scotia icefish genetic structure, possibly providing insights on its effective population size and demographic history. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Icefish Southern Ocean Padua Research Archive (IRIS - Università degli Studi di Padova) Antarctic Southern Ocean The Antarctic Antarctic Peninsula Molecular Ecology Notes 7 5 791 793
institution Open Polar
collection Padua Research Archive (IRIS - Università degli Studi di Padova)
op_collection_id ftunivpadovairis
language English
topic Microsatellite
Genetic marker
Antarctic fish
spellingShingle Microsatellite
Genetic marker
Antarctic fish
SUSANA E
BORTOLOTTO E
BUCCOLI S
PAPETTI, CHIARA
BARBISAN, FEDERICA
PATARNELLO, TOMASO
ZANE, LORENZO
Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae)
topic_facet Microsatellite
Genetic marker
Antarctic fish
description We characterized eight polymorphic microsatellites in the Scotia icefish Chaenocephalus aceratus (Perciformes, Notothenioidei, Channichthyidae) that is endemic of Southern Ocean waters surrounding the tip of the Antarctic Peninsula. Microsatellites were isolated from a partial genomic library enriched for an AC motif. The number of alleles ranged from two to 19 with a mean observed hererozygosity of 0.71. Loci were in Hardy–Weinberg equilibrium and no evidence for linkage disequilibrium was found. These molecular markers will be useful to investigate Scotia icefish genetic structure, possibly providing insights on its effective population size and demographic history.
author2 Susana, E
Papetti, Chiara
Barbisan, Federica
Bortolotto, E
Buccoli, S
Patarnello, Tomaso
Zane, Lorenzo
format Article in Journal/Newspaper
author SUSANA E
BORTOLOTTO E
BUCCOLI S
PAPETTI, CHIARA
BARBISAN, FEDERICA
PATARNELLO, TOMASO
ZANE, LORENZO
author_facet SUSANA E
BORTOLOTTO E
BUCCOLI S
PAPETTI, CHIARA
BARBISAN, FEDERICA
PATARNELLO, TOMASO
ZANE, LORENZO
author_sort SUSANA E
title Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae)
title_short Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae)
title_full Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae)
title_fullStr Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae)
title_full_unstemmed Isolation and characterization of eight microsatellite loci in the icefish Chaenocephalus aceratus (Perciformes, Notothenioidea, Channichthyidae)
title_sort isolation and characterization of eight microsatellite loci in the icefish chaenocephalus aceratus (perciformes, notothenioidea, channichthyidae)
publisher BBLACKWELL PUBLISHING, 9600 GARSINGTON RD, OXFORD OX4 2DQ, OXON, ENGLAND
publishDate 2007
url http://hdl.handle.net/11577/1777336
https://doi.org/10.1111/j.1471-8286.2007.01703.x
geographic Antarctic
Southern Ocean
The Antarctic
Antarctic Peninsula
geographic_facet Antarctic
Southern Ocean
The Antarctic
Antarctic Peninsula
genre Antarc*
Antarctic
Antarctic Peninsula
Icefish
Southern Ocean
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Icefish
Southern Ocean
op_relation info:eu-repo/semantics/altIdentifier/wos/WOS:000249193000014
volume:7
firstpage:791
lastpage:793
numberofpages:3
journal:MOLECULAR ECOLOGY NOTES
http://hdl.handle.net/11577/1777336
doi:10.1111/j.1471-8286.2007.01703.x
info:eu-repo/semantics/altIdentifier/scopus/2-s2.0-34548230380
op_doi https://doi.org/10.1111/j.1471-8286.2007.01703.x
container_title Molecular Ecology Notes
container_volume 7
container_issue 5
container_start_page 791
op_container_end_page 793
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