Heatmap of nonvisual opsins and clock genes in Atlantic salmon.

• Main Authors: Mariann Eilertsen (11502317), David W. P. Dolan (14247792), Charlotte M. Bolton (11780345), Rita Karlsen (13025421), Wayne I. L. Davies (8028890), Rolf B. Edvardsen (6913946), Tomasz Furmanek (283506), Harald Sveier (8218770), Herve Migaud (308426), Jon Vidar Helvik (8028887)
• Format: Still Image
• Language: unknown
• Published: 2022
• Subjects: Microbiology; Cell Biology; Genetics; Molecular Biology; Neuroscience; Physiology; Ecology; Developmental Biology; Inorganic Chemistry; Mental Health; Environmental Sciences not elsewhere classified; Biological Sciences not elsewhere classified; salmo salar </; atlantic salmon (<; complex photoreceptive system; photoperiod </ p; div >< p; early developmental stages; two clock genes; several clock genes; differing light conditions; developing teleost prior; circadian profile showed; different light conditions; constant white light; constant conditions; circadian profile; clock genes; white light; light conditions; constant light; significantly different; results showed; present prior; photoreceptive capacity; developmental series; expressed early; early development; light environment; light condition; green light; many genes; genes related; genes associated; transcriptomic response; transcriptome profile; study implies; significantly cycling; seasonal changes; poorly differentiated; Atlantic salmon; Salmo salar
• Online Access: https://doi.org/10.1371/journal.pgen.1010529.g001

The heatmap, scaled by row, shows the average normalized counts for nonvisual opsins (see S3 Table for annotations) and clock genes (see [ 38 ] for annotations) in the developmental series of embryos and alevins reared in light-dark cycles of medium intensity (LDM). Genes not expressed or not annotated at Ensembl were not included. The heatmaps show that many nonvisual opsins and clock genes are expressed early in development.