Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation

The metabolite screening of Haliclona viscosa yielded 21 3-alkyl pyridinium alkaloids whose structure was unknown before (haliclocyclin C, haliclamine K and J, dehydro-haliclamine J, dehydro-viscosaline E1, viscosamine D, dehydroviscosamine C and D) or had previously been suggested and could be refi...

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Main Author: Schmidt, Gesine
Other Authors: Köck, Matthias
Format: Doctoral or Postdoctoral Thesis
Language:English
Published: 2010
Subjects:
Online Access:https://doi.org/10.24355/dbbs.084-201012011211-0
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author Schmidt, Gesine
author2 Köck, Matthias
author_facet Schmidt, Gesine
author_sort Schmidt, Gesine
collection TU Braunschweig: LeoPARD - Publications And Research Data
description The metabolite screening of Haliclona viscosa yielded 21 3-alkyl pyridinium alkaloids whose structure was unknown before (haliclocyclin C, haliclamine K and J, dehydro-haliclamine J, dehydro-viscosaline E1, viscosamine D, dehydroviscosamine C and D) or had previously been suggested and could be refined or confirmed (haliclocyclin F1, haliclamine E and F, dehydro-haliclamine C, D, F, ambidehydro-haliclamine F and didehydro-haliclamine D, viscosaline B1, B2, E1 and E2, viscosamine B). The structure identification of haliclamines based on a mass spectrometric fragmentation study of the haliclamines; it forms part of this thesis and is enclosed in manuscript form to be published. New viscosalines and viscosamines were identified by evaluation of the high resolution mass spectra of a known viscosaline and viscosamine, and the observations concerning their fragmentation behavior are described in the presented thesis. Structure elucidation of 3-APAs that contain double bonds in the alkyl chains is in progress, as is the structure elucidation of still unknown 3-APAs in the crude extract eluting before 12 min and after 23 min. In the progress of developing a method that allows metabolite screening of different sponges by MALDI-MS, the Caribbean sponge Stylissa caribica was found to possess previously unknown compounds which were identified as the new cyclic heptapeptides stylissamides A-D. The stylissamides are very rich in proline and especially stylissamide B shows an interesting combination of amino acids, with three out of four prolines being arranged consecutively. Imposed by this configuration, the NMR signals of the stylissamides overlapped strongly but the structure elucidation could finally be achieved by a combination of extensive NMR and MS experiments. Das Metabolitenscreening in Haliclona viscosa ergab 21 3-Alkylpyridinalkaloide, deren Struktur vormals unbekannt war (Haliclocyclin C, Haliclamine K und J, dehydro-Haliclamin J, dehydro-Viscosalin E1, Viscosamin D, dehydro-Viscosamin C und D), oder deren ...
format Doctoral or Postdoctoral Thesis
genre Arctic
Arktis*
genre_facet Arctic
Arktis*
geographic Arctic
geographic_facet Arctic
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https://leopard.tu-braunschweig.de/receive/dbbs_mods_00036664
https://leopard.tu-braunschweig.de/servlets/MCRFileNodeServlet/dbbs_derivate_00016271/Diss_GS_mU.pdf
http://www.digibib.tu-bs.de/?docid=00036664
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spelling ftunivbraunschw:oai:https://leopard.tu-braunschweig.de/:dbbs_mods_00036664 2025-01-16T20:49:13+00:00 Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation Sekundärmetaboliten des arktischen Schwamms Haliclona viscosa – räumliche und zeitliche Variation Schmidt, Gesine Köck, Matthias 2010-08-13 259 Seiten https://doi.org/10.24355/dbbs.084-201012011211-0 https://nbn-resolving.org/urn:nbn:de:gbv:084-10120710107 https://leopard.tu-braunschweig.de/receive/dbbs_mods_00036664 https://leopard.tu-braunschweig.de/servlets/MCRFileNodeServlet/dbbs_derivate_00016271/Diss_GS_mU.pdf http://www.digibib.tu-bs.de/?docid=00036664 eng eng https://doi.org/10.24355/dbbs.084-201012011211-0 https://nbn-resolving.org/urn:nbn:de:gbv:084-10120710107 https://leopard.tu-braunschweig.de/receive/dbbs_mods_00036664 https://leopard.tu-braunschweig.de/servlets/MCRFileNodeServlet/dbbs_derivate_00016271/Diss_GS_mU.pdf http://www.digibib.tu-bs.de/?docid=00036664 all rights reserved public info:eu-repo/semantics/openAccess doctoral thesis ddc:543 dissertation Text doc-type:doctoralThesis 2010 ftunivbraunschw https://doi.org/10.24355/dbbs.084-201012011211-0 2024-04-02T14:08:42Z The metabolite screening of Haliclona viscosa yielded 21 3-alkyl pyridinium alkaloids whose structure was unknown before (haliclocyclin C, haliclamine K and J, dehydro-haliclamine J, dehydro-viscosaline E1, viscosamine D, dehydroviscosamine C and D) or had previously been suggested and could be refined or confirmed (haliclocyclin F1, haliclamine E and F, dehydro-haliclamine C, D, F, ambidehydro-haliclamine F and didehydro-haliclamine D, viscosaline B1, B2, E1 and E2, viscosamine B). The structure identification of haliclamines based on a mass spectrometric fragmentation study of the haliclamines; it forms part of this thesis and is enclosed in manuscript form to be published. New viscosalines and viscosamines were identified by evaluation of the high resolution mass spectra of a known viscosaline and viscosamine, and the observations concerning their fragmentation behavior are described in the presented thesis. Structure elucidation of 3-APAs that contain double bonds in the alkyl chains is in progress, as is the structure elucidation of still unknown 3-APAs in the crude extract eluting before 12 min and after 23 min. In the progress of developing a method that allows metabolite screening of different sponges by MALDI-MS, the Caribbean sponge Stylissa caribica was found to possess previously unknown compounds which were identified as the new cyclic heptapeptides stylissamides A-D. The stylissamides are very rich in proline and especially stylissamide B shows an interesting combination of amino acids, with three out of four prolines being arranged consecutively. Imposed by this configuration, the NMR signals of the stylissamides overlapped strongly but the structure elucidation could finally be achieved by a combination of extensive NMR and MS experiments. Das Metabolitenscreening in Haliclona viscosa ergab 21 3-Alkylpyridinalkaloide, deren Struktur vormals unbekannt war (Haliclocyclin C, Haliclamine K und J, dehydro-Haliclamin J, dehydro-Viscosalin E1, Viscosamin D, dehydro-Viscosamin C und D), oder deren ... Doctoral or Postdoctoral Thesis Arctic Arktis* TU Braunschweig: LeoPARD - Publications And Research Data Arctic
spellingShingle doctoral thesis
ddc:543
Schmidt, Gesine
Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation
title Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation
title_full Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation
title_fullStr Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation
title_full_unstemmed Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation
title_short Secondary Metabolites in the Arctic Sponge Haliclona viscosa - Spatial and Temporal Variation
title_sort secondary metabolites in the arctic sponge haliclona viscosa - spatial and temporal variation
topic doctoral thesis
ddc:543
topic_facet doctoral thesis
ddc:543
url https://doi.org/10.24355/dbbs.084-201012011211-0
https://nbn-resolving.org/urn:nbn:de:gbv:084-10120710107
https://leopard.tu-braunschweig.de/receive/dbbs_mods_00036664
https://leopard.tu-braunschweig.de/servlets/MCRFileNodeServlet/dbbs_derivate_00016271/Diss_GS_mU.pdf
http://www.digibib.tu-bs.de/?docid=00036664