Lampriformes in the Mediterranean Sea: distribution and life-history traits with whole genome sequencing of Zu cristatus (Bonelli, 1819)

The biodiversity of Mediterranean fish has been continuously evolving in the last decades because of non-indigenous species' invasions and the influences of global climate change. The distribution of teleost fishes is of fundamental importance to comprehending how these species contribute to th...

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Bibliographic Details
Main Author: ALBANO, Marco
Other Authors: Albano, Marco, SPANO', Nunziacarla
Format: Doctoral or Postdoctoral Thesis
Language:English
Published: 2022
Subjects:
Online Access:https://hdl.handle.net/11570/3243533
Description
Summary:The biodiversity of Mediterranean fish has been continuously evolving in the last decades because of non-indigenous species' invasions and the influences of global climate change. The distribution of teleost fishes is of fundamental importance to comprehending how these species contribute to the ecological equilibria of marine areas, especially in a semi-closed basin such as the Mediterranean Sea. Moreover, due to their biological features, several rare fish species are challenging to detect and identify during commercial fishing activities, and both morphological and genetic data on their regard are poor. Molecular approaches have recently provided several new insights into phylogeny classifications and genetics, but a broader database is required to boost these research fields. The fishes of the order Lampriformes are circumglobally distributed and characterized by a peculiar morphology, but the information on this fish group is scarce to absent due to their rarity. Here we report the occurrence in the Ionian Sea of Zu cristatus (Bonelli, 1819), a mesopelagic species from the order Lampriformes considered rare in the Mediterranean basin. The specimen was captured off the coast of Noto (Sicily, Italy) by deep-sea longline fisheries at a depth of 720 m. The sample was transported to the University of Messina laboratories for morphological identification and in-depth morphometric and meristic data analysis. The whole genome sequencing of the species was carried out on Illumina and Nanopore platforms in collaboration with the Nord University of Bodø, Norway. The final draft shows 82% completeness (BUSCO) compared to the actinopterygian genes database. The first complete mitogenome for the species was isolated and annotated on the GenBank database (Acc. PRJNA845808), and an extensive analysis of its features reveals exciting insights. Phylogenetic reconstruction of the order Lampriformes base of the mt-co1 sequences was performed; moreover, the phylogenetics relationships with other related orders were evaluated ...