Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves)
We isolated and tested 16 microsatellite loci in black-tailed godwits from the Netherlands (Limosa limosa limosa), and from Australasia (subspecies melanuroides). One locus was monomorphic, two loci had null-alleles and one was significantly heterozygote deficient. The remaining 12 polymorphic loci...
| Published in: | Molecular Ecology Resources |
|---|---|
| Main Authors: | , , , , |
| Format: | Article in Journal/Newspaper |
| Language: | English |
| Published: |
2009
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| Subjects: | |
| Online Access: | https://hdl.handle.net/11370/f76a1120-051c-49bf-b860-7bcb79c0f95e https://research.rug.nl/en/publications/f76a1120-051c-49bf-b860-7bcb79c0f95e https://doi.org/10.1111/j.1755-0998.2009.02685.x https://pure.rug.nl/ws/files/6735409/2009MolEcolResourVerkuil.pdf |
| _version_ | 1835007396607426560 |
|---|---|
| author | Verkuil, Yvonne I. Trimbos, Krijn Haddrath, Oliver Baker, Allan J. Piersma, Theunis |
| author_facet | Verkuil, Yvonne I. Trimbos, Krijn Haddrath, Oliver Baker, Allan J. Piersma, Theunis |
| author_sort | Verkuil, Yvonne I. |
| collection | Unknown |
| container_issue | 5 |
| container_start_page | 1415 |
| container_title | Molecular Ecology Resources |
| container_volume | 9 |
| description | We isolated and tested 16 microsatellite loci in black-tailed godwits from the Netherlands (Limosa limosa limosa), and from Australasia (subspecies melanuroides). One locus was monomorphic, two loci had null-alleles and one was significantly heterozygote deficient. The remaining 12 polymorphic loci had on average 7.9 alleles (range 5-11) and the mean expected heterozygosity was 0.69. No significant linkage disequilibrium between the loci was observed and all loci were autosomal. Fourteen loci were successfully cross-amplified in bar-tailed godwit (Limosa lapponica). |
| format | Article in Journal/Newspaper |
| genre | black-tailed godwit Limosa limosa |
| genre_facet | black-tailed godwit Limosa limosa |
| id | ftunigroningenpu:oai:pure.rug.nl:publications/f76a1120-051c-49bf-b860-7bcb79c0f95e |
| institution | Open Polar |
| language | English |
| op_collection_id | ftunigroningenpu |
| op_container_end_page | 1418 |
| op_doi | https://doi.org/10.1111/j.1755-0998.2009.02685.x |
| op_rights | info:eu-repo/semantics/openAccess |
| op_source | Verkuil, Y I, Trimbos, K, Haddrath, O, Baker, A J & Piersma, T 2009, 'Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa : Aves)', Molecular Ecology Resources, vol. 9, no. 5, pp. 1415-1418. https://doi.org/10.1111/j.1755-0998.2009.02685.x |
| publishDate | 2009 |
| record_format | openpolar |
| spelling | ftunigroningenpu:oai:pure.rug.nl:publications/f76a1120-051c-49bf-b860-7bcb79c0f95e 2025-06-15T14:52:06+00:00 Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves) Verkuil, Yvonne I. Trimbos, Krijn Haddrath, Oliver Baker, Allan J. Piersma, Theunis 2009-09 application/pdf https://hdl.handle.net/11370/f76a1120-051c-49bf-b860-7bcb79c0f95e https://research.rug.nl/en/publications/f76a1120-051c-49bf-b860-7bcb79c0f95e https://doi.org/10.1111/j.1755-0998.2009.02685.x https://pure.rug.nl/ws/files/6735409/2009MolEcolResourVerkuil.pdf eng eng info:eu-repo/semantics/openAccess Verkuil, Y I, Trimbos, K, Haddrath, O, Baker, A J & Piersma, T 2009, 'Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa : Aves)', Molecular Ecology Resources, vol. 9, no. 5, pp. 1415-1418. https://doi.org/10.1111/j.1755-0998.2009.02685.x black-tailed godwit ground-nesting shorebird Limosa limosa microsatellite population genetics SOFTWARE article 2009 ftunigroningenpu https://doi.org/10.1111/j.1755-0998.2009.02685.x 2025-05-19T08:39:21Z We isolated and tested 16 microsatellite loci in black-tailed godwits from the Netherlands (Limosa limosa limosa), and from Australasia (subspecies melanuroides). One locus was monomorphic, two loci had null-alleles and one was significantly heterozygote deficient. The remaining 12 polymorphic loci had on average 7.9 alleles (range 5-11) and the mean expected heterozygosity was 0.69. No significant linkage disequilibrium between the loci was observed and all loci were autosomal. Fourteen loci were successfully cross-amplified in bar-tailed godwit (Limosa lapponica). Article in Journal/Newspaper black-tailed godwit Limosa limosa Unknown Molecular Ecology Resources 9 5 1415 1418 |
| spellingShingle | black-tailed godwit ground-nesting shorebird Limosa limosa microsatellite population genetics SOFTWARE Verkuil, Yvonne I. Trimbos, Krijn Haddrath, Oliver Baker, Allan J. Piersma, Theunis Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves) |
| title | Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves) |
| title_full | Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves) |
| title_fullStr | Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves) |
| title_full_unstemmed | Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves) |
| title_short | Characterization of polymorphic microsatellite DNA markers in the black-tailed godwit (Limosa limosa:Aves) |
| title_sort | characterization of polymorphic microsatellite dna markers in the black-tailed godwit (limosa limosa:aves) |
| topic | black-tailed godwit ground-nesting shorebird Limosa limosa microsatellite population genetics SOFTWARE |
| topic_facet | black-tailed godwit ground-nesting shorebird Limosa limosa microsatellite population genetics SOFTWARE |
| url | https://hdl.handle.net/11370/f76a1120-051c-49bf-b860-7bcb79c0f95e https://research.rug.nl/en/publications/f76a1120-051c-49bf-b860-7bcb79c0f95e https://doi.org/10.1111/j.1755-0998.2009.02685.x https://pure.rug.nl/ws/files/6735409/2009MolEcolResourVerkuil.pdf |