Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum

Abstract Clostridium colinum is the causative agent of ulcerative enteritis (UE), a serious disease of bobwhite quail (Coluinus virginianus) and sporadically of young chickens. The aim of the present study was to develop a polymerase chain reaction assay specific for C. colinum identification. The 1...

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Published in:Avian Pathology
Language:English
Published: Taylor & Francis 2010
Subjects:
Online Access:http://hdl.handle.net/2262/46687
https://doi.org/10.1080/03079450801918662
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spelling fttrinitycoll:oai:tara.tcd.ie:2262/46687 2023-05-15T16:48:21+02:00 Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum 2010-12-15T04:13:13Z http://hdl.handle.net/2262/46687 https://doi.org/10.1080/03079450801918662 en eng Taylor & Francis N (eISSN) 0307-9457 (ISSN) CAVP-2007-0129 (PII) CAVP-2007-0129.R1 (manuscript) CAVP-2007-0129.R1 (publisherID) http://hdl.handle.net/2262/46687 Avian Pathology 37 02 179 181 doi:10.1080/03079450801918662 12 months Life Sciences 2010 fttrinitycoll https://doi.org/10.1080/03079450801918662 2020-02-16T13:50:23Z Abstract Clostridium colinum is the causative agent of ulcerative enteritis (UE), a serious disease of bobwhite quail (Coluinus virginianus) and sporadically of young chickens. The aim of the present study was to develop a polymerase chain reaction assay specific for C. colinum identification. The 16S rDNA sequence of C. colinum was analyzed and two species-specific primers were designed. The specificity of these primers was tested with closely related Clostridium species and the expected amplified product (935 bp) was observed only with DNA from samples containing C. colinum. Results from performing PCR assays on fecal samples from quails spiked with different concentrations of C. colinum showed that the detection limit of the assay was 1.6 x 104 CFU per gram of fecal material. This PCR assay can be used in diagnostic laboratories to confirm the presence of C. colinum in pure cultures and could be used to screen enriched samples or fecal samples for the presence of this pathogen. lbano@izsvenezie.it (Bano, Luca) idrigo@izsvenezie.it (Drigo, Ilenia) macklks@auburn.edu (Macklin, Kenneth S.) oyarzoa@auburn.edu (Oyarzabal, Omar A.) BILGISF@auburn.edu (Bilgili, Sacit F.) Istituto Zooprofilattico delle Venezie - viale Brigata Treviso 13/a--> - 31100 - Treviso - ITALY (Bano, Luca) ICELAND (Bano, Luca) Istituto Zooprofilattico delle Venezie - Treviso - ITALY (Drigo, Ilenia) Auburn University, Poultry Science - Auburn - UNITED STATES (Macklin, Kenneth S.) Auburn University, Poultry Science - Auburn - UNITED STATES (Oyarzabal, Omar A.) Auburn University, Poultry Science - Auburn - UNITED STATES (Bilgili, Sacit F.) ICELAND ITALY UNITED STATES Other/Unknown Material Iceland The University of Dublin, Trinity College: TARA (Trinity's Access to Research Archive) Macklin ENVELOPE(64.600,64.600,-69.950,-69.950) Avian Pathology 37 2 179 181
institution Open Polar
collection The University of Dublin, Trinity College: TARA (Trinity's Access to Research Archive)
op_collection_id fttrinitycoll
language English
topic Life Sciences
spellingShingle Life Sciences
Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum
topic_facet Life Sciences
description Abstract Clostridium colinum is the causative agent of ulcerative enteritis (UE), a serious disease of bobwhite quail (Coluinus virginianus) and sporadically of young chickens. The aim of the present study was to develop a polymerase chain reaction assay specific for C. colinum identification. The 16S rDNA sequence of C. colinum was analyzed and two species-specific primers were designed. The specificity of these primers was tested with closely related Clostridium species and the expected amplified product (935 bp) was observed only with DNA from samples containing C. colinum. Results from performing PCR assays on fecal samples from quails spiked with different concentrations of C. colinum showed that the detection limit of the assay was 1.6 x 104 CFU per gram of fecal material. This PCR assay can be used in diagnostic laboratories to confirm the presence of C. colinum in pure cultures and could be used to screen enriched samples or fecal samples for the presence of this pathogen. lbano@izsvenezie.it (Bano, Luca) idrigo@izsvenezie.it (Drigo, Ilenia) macklks@auburn.edu (Macklin, Kenneth S.) oyarzoa@auburn.edu (Oyarzabal, Omar A.) BILGISF@auburn.edu (Bilgili, Sacit F.) Istituto Zooprofilattico delle Venezie - viale Brigata Treviso 13/a--> - 31100 - Treviso - ITALY (Bano, Luca) ICELAND (Bano, Luca) Istituto Zooprofilattico delle Venezie - Treviso - ITALY (Drigo, Ilenia) Auburn University, Poultry Science - Auburn - UNITED STATES (Macklin, Kenneth S.) Auburn University, Poultry Science - Auburn - UNITED STATES (Oyarzabal, Omar A.) Auburn University, Poultry Science - Auburn - UNITED STATES (Bilgili, Sacit F.) ICELAND ITALY UNITED STATES
title Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum
title_short Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum
title_full Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum
title_fullStr Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum
title_full_unstemmed Development of a Polymerase Chain Reaction Assay for Specific Identification of Clostridium colinum
title_sort development of a polymerase chain reaction assay for specific identification of clostridium colinum
publisher Taylor & Francis
publishDate 2010
url http://hdl.handle.net/2262/46687
https://doi.org/10.1080/03079450801918662
long_lat ENVELOPE(64.600,64.600,-69.950,-69.950)
geographic Macklin
geographic_facet Macklin
genre Iceland
genre_facet Iceland
op_relation N (eISSN)
0307-9457 (ISSN)
CAVP-2007-0129 (PII)
CAVP-2007-0129.R1 (manuscript)
CAVP-2007-0129.R1 (publisherID)
http://hdl.handle.net/2262/46687
Avian Pathology
37
02
179
181
doi:10.1080/03079450801918662
op_rights 12 months
op_doi https://doi.org/10.1080/03079450801918662
container_title Avian Pathology
container_volume 37
container_issue 2
container_start_page 179
op_container_end_page 181
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