Comparative Genomics of Tenacibaculum dicentrarchi and “Tenacibaculum finnmarkense” Highlights Intricate Evolution of Fish-Pathogenic Species
Data deposition: All genome sequencing data have been deposited at the European Nucleotide Archive under the accessions GCA_900239455, GCA_900239305, GCA_900239485, GCA_900239185, GCA_900239505, GCA_900239345, and GCA_900239495. International audience The genus Tenacibaculum encompasses several spec...
Published in: | Genome Biology and Evolution |
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Main Authors: | , , , , , , |
Other Authors: | , , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
HAL CCSD
2018
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Subjects: | |
Online Access: | https://hal.sorbonne-universite.fr/hal-01744087 https://hal.sorbonne-universite.fr/hal-01744087/document https://hal.sorbonne-universite.fr/hal-01744087/file/evy020.pdf https://doi.org/10.1093/gbe/evy020 |
Summary: | Data deposition: All genome sequencing data have been deposited at the European Nucleotide Archive under the accessions GCA_900239455, GCA_900239305, GCA_900239485, GCA_900239185, GCA_900239505, GCA_900239345, and GCA_900239495. International audience The genus Tenacibaculum encompasses several species pathogenic for marine fish. Tenacibaculum dicentrarchi and " Tenacibaculum finnmarkense " (Quotation marks denote species that have not been validly named.) were retrieved from skin lesions of farmed fish such as European sea bass or Atlantic salmon. They cause a condition referred to as tenacibaculosis and severe outbreaks and important fish losses have been reported in Spanish, Norwegian, and Chilean marine farms. We report here the draft genomes of the T. dicentrarchi and " T. finnmarkense " type strains. These genomes were compared with draft genomes from field isolates retrieved from Chile and Norway and with previously published Tenacibaculum genomes. We used Average Nucleotide Identity and core genome-based phylogeny as a proxy index for species boundary delineation. This work highlights evolution of closely related fish-pathogenic species and suggests that homologous recombination likely contributes to genome evolution. |
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