Phylogenetic tree of 11 Pseudomonas study strains based on the concatenated sequences of protein-coding genes gyrB-ileS-nuoD-recA-rpoD using RAxML.

Support values are calculated from 1000 rapid bootstrap replicates (BT). BT values of 50 or more are indicated at branching points. The scale bar corresponds to the average number of nucleotide substitutions per site. Our test strains are marked in bold, that form a separate cluster with P . antarct...

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Bibliographic Details
Main Authors: Srijana Mukhia (9025058), Anil Kumar (105720), Poonam Kumari (6175139), Rakshak Kumar (125841), Sanjay Kumar (8853)
Format: Still Image
Language:unknown
Published: 2022
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Online Access:https://doi.org/10.1371/journal.pone.0261178.g003
Description
Summary:Support values are calculated from 1000 rapid bootstrap replicates (BT). BT values of 50 or more are indicated at branching points. The scale bar corresponds to the average number of nucleotide substitutions per site. Our test strains are marked in bold, that form a separate cluster with P . antarctica PAMC 27494. E . coli K12 MG1655 was used as the outgroup organism. Partitionfinder v2.1.1 was used to determine the best-fit partitioning schemes and substitution models of molecular evolution.