Phylogenetic trees of 11 Pseudomonas strains based on individual protein-coding genes gyrB , ileS , nuoD , recA , and rpoD using RAxML.

• Main Authors: Srijana Mukhia (9025058), Anil Kumar (105720), Poonam Kumari (6175139), Rakshak Kumar (125841), Sanjay Kumar (8853)
• Format: Other Non-Article Part of Journal/Newspaper
• Language: unknown
• Published: 2022
• Subjects: Microbiology; Genetics; Biotechnology; Evolutionary Biology; Ecology; Marine Biology; Inorganic Chemistry; Environmental Sciences not elsewhere classified; Biological Sciences not elsewhere classified; Chemical Sciences not elsewhere classified; unique adaptive features; mesophilic control strain; extreme environmental conditions; 96 hours compared; 73 %) compared; showed taxonomic ambiguity; highest ani value; high ultraviolet radiations; div >< p; pseudomonas antarctica </; obtained eleven strains; pseudomonas </; p </; antarctica </; taxonomic assignment; dddh value; c radiations; fluorescens </; tolerance abilities; supraglacial site; supraglacial ice; sikkim himalaya; representative strains; radiation resistance; polyadaptational attributes; physiological findings; pamc 27494; microorganisms inhabiting; frequent freeze; four strains; diverse genera; current study; correct taxonomy; biotechnologically significant; based assays; associated genes; adaptational strategies; active enzymes; 65 %); 05 could; Antarc*; Antarctica
• Online Access: https://doi.org/10.1371/journal.pone.0261178.s007

Sequences of the neighbouring strains were retrieved from the complete genome sequences from GenBank database. Support values are calculated from 500 rapid bootstrap replicates. BT values of 50 or more are indicated at branching points. The scale bar corresponds to the average number of nucleotide substitutions per site. Our test strains are marked in bold. E . coli K12 MG1655 was used as the outgroup organism. Partitionfinder v2.1.1 was used to determine the best-fit partitioning schemes and substitution models of molecular evolution. (PDF)