Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains.

Nonconservative amino acids substitutions (red; consensus residue: Position: Substitution) are as follows: Transmembrane region (TM) I: Thr89Met (walrus, manatee, polar bear); Thr93Iso (manatee); TMII: Ala123Thr (manatee); Ala128Thr (Yangtze river dolphin); TMIV: Ala187Thr (beluga whale, harbor porp...

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Main Authors: Jeffry I. Fasick (3624569), Haya Algrain (11570761), Courtland Samuels (11570764), Padmanabhan Mahadevan (475388), Lorian E. Schweikert (3624572), Zaid J. Naffaa (11570767), Phyllis R. Robinson (204369)
Format: Still Image
Language:unknown
Published: 2021
Subjects:
Biochemistry
Cell Biology
Molecular Biology
Neuroscience
Evolutionary Biology
Ecology
Virology
Environmental Sciences not elsewhere classified
water &# 8217
serve light detection
retinal ganglion cells
carboxyl terminal domain
available light spectra
marine mammal rhodopsins
thus longer mydriasis
extended pupillary constriction
amino acid substitutions
marine mammal species
div >< p
marine mammals may
marine mammals
pupil constriction
mydriasis occurs
identify substitutions
given species
values tuned
values relative
terrestrial counterparts
terrestrial controls
spectral tuning
spectral sensitivity
solar irradiance
significant change
rod retina
rod monochromacy
results suggest
results show
previous work
prevent photobleaching
orders sirenia
likely involved
infraorder cetacea
highly photosensitive
foraging depths
deactivation kinetics
condition known
cdna sequences
absorbance maxima
Weddell
Beluga
Beluga whale
Beluga*
Weddell Seal
walrus*
Online Access:https://doi.org/10.1371/journal.pone.0257436.g003
id ftsmithonian:oai:figshare.com:article/16820464
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/16820464 2023-05-15T15:41:51+02:00 Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains. Jeffry I. Fasick (3624569) Haya Algrain (11570761) Courtland Samuels (11570764) Padmanabhan Mahadevan (475388) Lorian E. Schweikert (3624572) Zaid J. Naffaa (11570767) Phyllis R. Robinson (204369) 2021-10-15T17:31:17Z https://doi.org/10.1371/journal.pone.0257436.g003 unknown https://figshare.com/articles/figure/Nonconservative_amino_acid_substitutions_between_marine_mammals_cow_and_mouse_melanopsins_Opn4_within_transmembrane_domains_/16820464 doi:10.1371/journal.pone.0257436.g003 CC BY 4.0 CC-BY Biochemistry Cell Biology Molecular Biology Neuroscience Evolutionary Biology Ecology Virology Environmental Sciences not elsewhere classified water &# 8217 serve light detection retinal ganglion cells carboxyl terminal domain available light spectra marine mammal rhodopsins thus longer mydriasis extended pupillary constriction amino acid substitutions marine mammal species div >< p marine mammals may marine mammals pupil constriction mydriasis occurs identify substitutions given species values tuned values relative terrestrial counterparts terrestrial controls spectral tuning spectral sensitivity solar irradiance significant change rod retina rod monochromacy results suggest results show previous work prevent photobleaching orders sirenia likely involved infraorder cetacea highly photosensitive foraging depths deactivation kinetics condition known cdna sequences absorbance maxima Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0257436.g003 2021-12-20T00:06:09Z Nonconservative amino acids substitutions (red; consensus residue: Position: Substitution) are as follows: Transmembrane region (TM) I: Thr89Met (walrus, manatee, polar bear); Thr93Iso (manatee); TMII: Ala123Thr (manatee); Ala128Thr (Yangtze river dolphin); TMIV: Ala187Thr (beluga whale, harbor porpoise, Yangtze finless porpoise,); ECL II: Ala233Thr (manatee); ICL III: Glu295Ala (manatee and mouse); TMVI: Thr311Ala (Weddell seal); Val/Met315Thr (Weddell seal, walrus); TMVII: Tyr342His (Weddell seal, walrus, manatee, polar bear and mouse). Opn4 numbering is from mouse. Still Image Beluga Beluga whale Beluga* Weddell Seal walrus* Unknown Weddell
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Biochemistry
Cell Biology
Molecular Biology
Neuroscience
Evolutionary Biology
Ecology
Virology
Environmental Sciences not elsewhere classified
water &# 8217
serve light detection
retinal ganglion cells
carboxyl terminal domain
available light spectra
marine mammal rhodopsins
thus longer mydriasis
extended pupillary constriction
amino acid substitutions
marine mammal species
div >< p
marine mammals may
marine mammals
pupil constriction
mydriasis occurs
identify substitutions
given species
values tuned
values relative
terrestrial counterparts
terrestrial controls
spectral tuning
spectral sensitivity
solar irradiance
significant change
rod retina
rod monochromacy
results suggest
results show
previous work
prevent photobleaching
orders sirenia
likely involved
infraorder cetacea
highly photosensitive
foraging depths
deactivation kinetics
condition known
cdna sequences
absorbance maxima
spellingShingle Biochemistry
Cell Biology
Molecular Biology
Neuroscience
Evolutionary Biology
Ecology
Virology
Environmental Sciences not elsewhere classified
water &# 8217
serve light detection
retinal ganglion cells
carboxyl terminal domain
available light spectra
marine mammal rhodopsins
thus longer mydriasis
extended pupillary constriction
amino acid substitutions
marine mammal species
div >< p
marine mammals may
marine mammals
pupil constriction
mydriasis occurs
identify substitutions
given species
values tuned
values relative
terrestrial counterparts
terrestrial controls
spectral tuning
spectral sensitivity
solar irradiance
significant change
rod retina
rod monochromacy
results suggest
results show
previous work
prevent photobleaching
orders sirenia
likely involved
infraorder cetacea
highly photosensitive
foraging depths
deactivation kinetics
condition known
cdna sequences
absorbance maxima
Jeffry I. Fasick (3624569)
Haya Algrain (11570761)
Courtland Samuels (11570764)
Padmanabhan Mahadevan (475388)
Lorian E. Schweikert (3624572)
Zaid J. Naffaa (11570767)
Phyllis R. Robinson (204369)
Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains.
topic_facet Biochemistry
Cell Biology
Molecular Biology
Neuroscience
Evolutionary Biology
Ecology
Virology
Environmental Sciences not elsewhere classified
water &# 8217
serve light detection
retinal ganglion cells
carboxyl terminal domain
available light spectra
marine mammal rhodopsins
thus longer mydriasis
extended pupillary constriction
amino acid substitutions
marine mammal species
div >< p
marine mammals may
marine mammals
pupil constriction
mydriasis occurs
identify substitutions
given species
values tuned
values relative
terrestrial counterparts
terrestrial controls
spectral tuning
spectral sensitivity
solar irradiance
significant change
rod retina
rod monochromacy
results suggest
results show
previous work
prevent photobleaching
orders sirenia
likely involved
infraorder cetacea
highly photosensitive
foraging depths
deactivation kinetics
condition known
cdna sequences
absorbance maxima
description Nonconservative amino acids substitutions (red; consensus residue: Position: Substitution) are as follows: Transmembrane region (TM) I: Thr89Met (walrus, manatee, polar bear); Thr93Iso (manatee); TMII: Ala123Thr (manatee); Ala128Thr (Yangtze river dolphin); TMIV: Ala187Thr (beluga whale, harbor porpoise, Yangtze finless porpoise,); ECL II: Ala233Thr (manatee); ICL III: Glu295Ala (manatee and mouse); TMVI: Thr311Ala (Weddell seal); Val/Met315Thr (Weddell seal, walrus); TMVII: Tyr342His (Weddell seal, walrus, manatee, polar bear and mouse). Opn4 numbering is from mouse.
format Still Image
author Jeffry I. Fasick (3624569)
Haya Algrain (11570761)
Courtland Samuels (11570764)
Padmanabhan Mahadevan (475388)
Lorian E. Schweikert (3624572)
Zaid J. Naffaa (11570767)
Phyllis R. Robinson (204369)
author_facet Jeffry I. Fasick (3624569)
Haya Algrain (11570761)
Courtland Samuels (11570764)
Padmanabhan Mahadevan (475388)
Lorian E. Schweikert (3624572)
Zaid J. Naffaa (11570767)
Phyllis R. Robinson (204369)
author_sort Jeffry I. Fasick (3624569)
title Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains.
title_short Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains.
title_full Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains.
title_fullStr Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains.
title_full_unstemmed Nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (Opn4) within transmembrane domains.
title_sort nonconservative amino acid substitutions between marine mammals, cow, and mouse melanopsins (opn4) within transmembrane domains.
publishDate 2021
url https://doi.org/10.1371/journal.pone.0257436.g003
geographic Weddell
geographic_facet Weddell
genre Beluga
Beluga whale
Beluga*
Weddell Seal
walrus*
genre_facet Beluga
Beluga whale
Beluga*
Weddell Seal
walrus*
op_relation https://figshare.com/articles/figure/Nonconservative_amino_acid_substitutions_between_marine_mammals_cow_and_mouse_melanopsins_Opn4_within_transmembrane_domains_/16820464
doi:10.1371/journal.pone.0257436.g003
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pone.0257436.g003
_version_ 1766374734817132544

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