Additional file 9 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities

Additional file 8: Figure S2. Specificity of the primers that target Lactobacillus and Mycoplasma genus. The results in figure summarise bacterial genus targeted by Lactobacillus (Fig. 1 A, B, C) and Mycoplasma (Fig. 1 D, E, F) specific primer set. It shows that of all genus captured by Lactobacillu...

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Bibliographic Details
Main Authors: Raminta Kazlauskaite (11368785), Bachar Cheaib (718391), Chloe Heys (3267108), Umer Zeeshan Ijaz (3769318), Stephanie Connelly (8926943), William Sloan (523554), Julie Russel (11368788), Laura Rubio (2662996), John Sweetman (739905), Alex Kitts (11368791), Philip McGinnity (3250896), Philip Lyons (11368794), Martin Llewellyn (6532214)
Format: Other Non-Article Part of Journal/Newspaper
Language:unknown
Published: 2021
Subjects:
Microbiology
Genetics
SalmoSim
Gut microbiota
In vitro gut model system
Atlantic salmon
NGS
Online Access:https://doi.org/10.6084/m9.figshare.16551243.v1
Description
Summary:Additional file 8: Figure S2. Specificity of the primers that target Lactobacillus and Mycoplasma genus. The results in figure summarise bacterial genus targeted by Lactobacillus (Fig. 1 A, B, C) and Mycoplasma (Fig. 1 D, E, F) specific primer set. It shows that of all genus captured by Lactobacillus primer pair 98% were Lactobacillus in fish 1, 78% in fish 2, and 65% in fish 3. While of all genus captured by Mycoplasma primer pair 95% were Mycoplasma in fish 1, 79% in fish 2, and 56% in fish 3.

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