Synteny analysis between ayu genome and those of other teleost fishes.

Oxford plot between ayu genome and (A) medaka, (B) northern pike, (C) rainbow trout, (D), Atlantic salmon, (E) zebrafish, and spotted gar (F). Numbers refer to pairs of orthologous genes clustered by reciprocal best hits algorithm. “Sex” in bottom row of each panel indicates sex-linked scaffolds det...

Full description

Bibliographic Details
Main Authors: Masatoshi Nakamoto (3138825), Tsubasa Uchino (11337111), Eriko Koshimizu (53194), Yudai Kuchiishi (11337114), Ryota Sekiguchi (11337117), Liu Wang (213066), Ryusuke Sudo (5431058), Masato Endo (11337120), Yann Guiguen (65559), Manfred Schartl (75405), John H. Postlethwait (9231408), Takashi Sakamoto (417987)
Format: Still Image
Language:unknown
Published: 2021
Subjects:
Cell Biology
Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Y-linked amhr 2 gene
genome compaction
whole-genome resequencing mapping c.
genome-wide association study
Plecoglossus altivelis Whole-genome.
draft genome sequence
amhr 2bY
Genome-wide association mapping
anti-M üllerian hormone type-II rec.
male-specific regions
teleost fish evolution
sex-linked scaffolds
amhr 2
XX
whole-genome shotgun sequencing
ayu Y chromosome
Y-linked anti-M üllerian hormone ty.
autosomal amhr 2 transcripts
male-specific amh-amhr 2 pathway
Gar’
Atlantic salmon
Online Access:https://doi.org/10.1371/journal.pgen.1009705.s007
Description
Summary:Oxford plot between ayu genome and (A) medaka, (B) northern pike, (C) rainbow trout, (D), Atlantic salmon, (E) zebrafish, and spotted gar (F). Numbers refer to pairs of orthologous genes clustered by reciprocal best hits algorithm. “Sex” in bottom row of each panel indicates sex-linked scaffolds detected by genome-wide association study, not only putative Y-specific regions. (JPG)

Similar Items