Bayesian phylogenetic tree of Hymenolepis microstoma NRs.

The phylogenetic tree of H . microstoma NRs represents all analyzed Hymenolepis species because of the highly conserved DBD sequences in these species. Methods for construction of phylogenetic trees see S1 Fig legend. ML model tested as LG+G+I (Equilibrium frequencies: Model, Proportion of invariabl...

Full description

Bibliographic Details
Main Authors: Wenjie Wu (81279), Philip T. LoVerde (7548587)
Format: Still Image
Language:unknown
Published: 2021
Subjects:
Biochemistry
Medicine
Cell Biology
Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
free-living intertidal zone flatworm
novel zinc finger motif
Platyhelminth NRs
flatworm genome data
NR subfamily 3
CHC 2 motif
Platyhelminth HR 96b
DBD
DNA binding domain
C 4-type zinc finger motifs
NR gene duplication
Crassostrea gigas
Online Access:https://doi.org/10.1371/journal.pone.0250750.s005
id ftsmithonian:oai:figshare.com:article/15166052
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/15166052 2023-05-15T15:58:31+02:00 Bayesian phylogenetic tree of Hymenolepis microstoma NRs. Wenjie Wu (81279) Philip T. LoVerde (7548587) 2021-08-13T17:31:53Z https://doi.org/10.1371/journal.pone.0250750.s005 unknown https://figshare.com/articles/figure/Bayesian_phylogenetic_tree_of_i_Hymenolepis_microstoma_i_NRs_/15166052 doi:10.1371/journal.pone.0250750.s005 CC BY 4.0 CC-BY Biochemistry Medicine Cell Biology Genetics Evolutionary Biology Ecology Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified free-living intertidal zone flatworm novel zinc finger motif Platyhelminth NRs flatworm genome data NR subfamily 3 CHC 2 motif Platyhelminth HR 96b DBD DNA binding domain C 4-type zinc finger motifs NR gene duplication Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0250750.s005 2021-12-20T04:22:30Z The phylogenetic tree of H . microstoma NRs represents all analyzed Hymenolepis species because of the highly conserved DBD sequences in these species. Methods for construction of phylogenetic trees see S1 Fig legend. ML model tested as LG+G+I (Equilibrium frequencies: Model, Proportion of invariable sites: Estimated (0.092), Number of substitution rate categories: 4, Gamma shape parameter: Estimated (0.709). Bg: Biomphalaria glabrata , Cg: Crassostrea gigas , d: Drosophila melanogaster , h: Homo sapiens , Hm: Hymenolepis microstoma , Lg: Lottia gigantean , Px: Protopolystoma xenopodis , Sm: Schistosoma mansoni . Red highlighted NRs show H . microstoma NRs. (TIF) Still Image Crassostrea gigas Unknown
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Biochemistry
Medicine
Cell Biology
Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
free-living intertidal zone flatworm
novel zinc finger motif
Platyhelminth NRs
flatworm genome data
NR subfamily 3
CHC 2 motif
Platyhelminth HR 96b
DBD
DNA binding domain
C 4-type zinc finger motifs
NR gene duplication
spellingShingle Biochemistry
Medicine
Cell Biology
Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
free-living intertidal zone flatworm
novel zinc finger motif
Platyhelminth NRs
flatworm genome data
NR subfamily 3
CHC 2 motif
Platyhelminth HR 96b
DBD
DNA binding domain
C 4-type zinc finger motifs
NR gene duplication
Wenjie Wu (81279)
Philip T. LoVerde (7548587)
Bayesian phylogenetic tree of Hymenolepis microstoma NRs.
topic_facet Biochemistry
Medicine
Cell Biology
Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
free-living intertidal zone flatworm
novel zinc finger motif
Platyhelminth NRs
flatworm genome data
NR subfamily 3
CHC 2 motif
Platyhelminth HR 96b
DBD
DNA binding domain
C 4-type zinc finger motifs
NR gene duplication
description The phylogenetic tree of H . microstoma NRs represents all analyzed Hymenolepis species because of the highly conserved DBD sequences in these species. Methods for construction of phylogenetic trees see S1 Fig legend. ML model tested as LG+G+I (Equilibrium frequencies: Model, Proportion of invariable sites: Estimated (0.092), Number of substitution rate categories: 4, Gamma shape parameter: Estimated (0.709). Bg: Biomphalaria glabrata , Cg: Crassostrea gigas , d: Drosophila melanogaster , h: Homo sapiens , Hm: Hymenolepis microstoma , Lg: Lottia gigantean , Px: Protopolystoma xenopodis , Sm: Schistosoma mansoni . Red highlighted NRs show H . microstoma NRs. (TIF)
format Still Image
author Wenjie Wu (81279)
Philip T. LoVerde (7548587)
author_facet Wenjie Wu (81279)
Philip T. LoVerde (7548587)
author_sort Wenjie Wu (81279)
title Bayesian phylogenetic tree of Hymenolepis microstoma NRs.
title_short Bayesian phylogenetic tree of Hymenolepis microstoma NRs.
title_full Bayesian phylogenetic tree of Hymenolepis microstoma NRs.
title_fullStr Bayesian phylogenetic tree of Hymenolepis microstoma NRs.
title_full_unstemmed Bayesian phylogenetic tree of Hymenolepis microstoma NRs.
title_sort bayesian phylogenetic tree of hymenolepis microstoma nrs.
publishDate 2021
url https://doi.org/10.1371/journal.pone.0250750.s005
genre Crassostrea gigas
genre_facet Crassostrea gigas
op_relation https://figshare.com/articles/figure/Bayesian_phylogenetic_tree_of_i_Hymenolepis_microstoma_i_NRs_/15166052
doi:10.1371/journal.pone.0250750.s005
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pone.0250750.s005
_version_ 1766394262497263616

Similar Items