Neutral genetic structure between red fox from Alaska and Ontario.

Analyses of the 43 SNPs in intergenic regions after filtering with Variant Effect Predictor , a MAF threshold = 2%, and pruning for Linkage disequilibrium; CN = central Alaska; SP = Seward Peninsula; SW = Southwest Alaska; ON = Ontario, Canada a) principle component analysis b) power analysis result...

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Main Authors: Tristan M. Baecklund (10573715), Jaycee Morrison (10573718), Michael E. Donaldson (4431115), Karsten Hueffer (606200), Christopher J. Kyle (8136867)
Format: Still Image
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.1371/journal.pone.0249176.g002
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author Tristan M. Baecklund (10573715)
Jaycee Morrison (10573718)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_facet Tristan M. Baecklund (10573715)
Jaycee Morrison (10573718)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_sort Tristan M. Baecklund (10573715)
collection Smithsonian Institution: Digital Repository
description Analyses of the 43 SNPs in intergenic regions after filtering with Variant Effect Predictor , a MAF threshold = 2%, and pruning for Linkage disequilibrium; CN = central Alaska; SP = Seward Peninsula; SW = Southwest Alaska; ON = Ontario, Canada a) principle component analysis b) power analysis results for the estimated Fisher’s exact F ST and Chi 2 after t = 0, 10, 100, 500, and 1,000 generations and assuming an effective population size of 5,000 c) STRUTURE analysis of K = 2 and K = 3, where individuals are represented by each bar along the x-axis and assignment to clusters is represented by the y-axis and the different colours.
format Still Image
genre Seward Peninsula
Alaska
genre_facet Seward Peninsula
Alaska
geographic Canada
The ''Y''
geographic_facet Canada
The ''Y''
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institution Open Polar
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long_lat ENVELOPE(-112.453,-112.453,57.591,57.591)
op_collection_id ftsmithonian
op_doi https://doi.org/10.1371/journal.pone.0249176.g002
op_relation https://figshare.com/articles/figure/Neutral_genetic_structure_between_red_fox_from_Alaska_and_Ontario_/14389715
doi:10.1371/journal.pone.0249176.g002
op_rights CC BY 4.0
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spelling ftsmithonian:oai:figshare.com:article/14389715 2025-01-17T00:46:50+00:00 Neutral genetic structure between red fox from Alaska and Ontario. Tristan M. Baecklund (10573715) Jaycee Morrison (10573718) Michael E. Donaldson (4431115) Karsten Hueffer (606200) Christopher J. Kyle (8136867) 2021-04-08T17:48:11Z https://doi.org/10.1371/journal.pone.0249176.g002 unknown https://figshare.com/articles/figure/Neutral_genetic_structure_between_red_fox_from_Alaska_and_Ontario_/14389715 doi:10.1371/journal.pone.0249176.g002 CC BY 4.0 CC-BY Genetics Evolutionary Biology Ecology Infectious Diseases Biological Sciences not elsewhere classified toll-like receptor genes cause missense mutations AR variants 30 outlier SNPs disease control strategies Vulpes vulpes rabies variant distributions fox populations 116 genomic regions Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0249176.g002 2021-04-11T15:09:24Z Analyses of the 43 SNPs in intergenic regions after filtering with Variant Effect Predictor , a MAF threshold = 2%, and pruning for Linkage disequilibrium; CN = central Alaska; SP = Seward Peninsula; SW = Southwest Alaska; ON = Ontario, Canada a) principle component analysis b) power analysis results for the estimated Fisher’s exact F ST and Chi 2 after t = 0, 10, 100, 500, and 1,000 generations and assuming an effective population size of 5,000 c) STRUTURE analysis of K = 2 and K = 3, where individuals are represented by each bar along the x-axis and assignment to clusters is represented by the y-axis and the different colours. Still Image Seward Peninsula Alaska Smithsonian Institution: Digital Repository Canada The ''Y'' ENVELOPE(-112.453,-112.453,57.591,57.591)
spellingShingle Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Biological Sciences not elsewhere classified
toll-like receptor genes
cause missense mutations
AR variants
30 outlier SNPs
disease control strategies
Vulpes vulpes
rabies variant distributions
fox populations
116 genomic regions
Tristan M. Baecklund (10573715)
Jaycee Morrison (10573718)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
Neutral genetic structure between red fox from Alaska and Ontario.
title Neutral genetic structure between red fox from Alaska and Ontario.
title_full Neutral genetic structure between red fox from Alaska and Ontario.
title_fullStr Neutral genetic structure between red fox from Alaska and Ontario.
title_full_unstemmed Neutral genetic structure between red fox from Alaska and Ontario.
title_short Neutral genetic structure between red fox from Alaska and Ontario.
title_sort neutral genetic structure between red fox from alaska and ontario.
topic Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Biological Sciences not elsewhere classified
toll-like receptor genes
cause missense mutations
AR variants
30 outlier SNPs
disease control strategies
Vulpes vulpes
rabies variant distributions
fox populations
116 genomic regions
topic_facet Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Biological Sciences not elsewhere classified
toll-like receptor genes
cause missense mutations
AR variants
30 outlier SNPs
disease control strategies
Vulpes vulpes
rabies variant distributions
fox populations
116 genomic regions
url https://doi.org/10.1371/journal.pone.0249176.g002