Neutral genetic structure between red fox from Alaska and Ontario.

Analyses of the 43 SNPs in intergenic regions after filtering with Variant Effect Predictor , a MAF threshold = 2%, and pruning for Linkage disequilibrium; CN = central Alaska; SP = Seward Peninsula; SW = Southwest Alaska; ON = Ontario, Canada a) principle component analysis b) power analysis result...

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Bibliographic Details
Main Authors: Tristan M. Baecklund (10573715), Jaycee Morrison (10573718), Michael E. Donaldson (4431115), Karsten Hueffer (606200), Christopher J. Kyle (8136867)
Format: Still Image
Language:unknown
Published: 2021
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Online Access:https://doi.org/10.1371/journal.pone.0249176.g002
Description
Summary:Analyses of the 43 SNPs in intergenic regions after filtering with Variant Effect Predictor , a MAF threshold = 2%, and pruning for Linkage disequilibrium; CN = central Alaska; SP = Seward Peninsula; SW = Southwest Alaska; ON = Ontario, Canada a) principle component analysis b) power analysis results for the estimated Fisher’s exact F ST and Chi 2 after t = 0, 10, 100, 500, and 1,000 generations and assuming an effective population size of 5,000 c) STRUTURE analysis of K = 2 and K = 3, where individuals are represented by each bar along the x-axis and assignment to clusters is represented by the y-axis and the different colours.