In Situ Cultivation Allows for Recovery of Bacterial Types Competitive in Their Natural Environment

Standard cultivation fails to grow most microorganisms, whereas in situ cultivation allows for the isolation of comparatively diverse and novel microorganisms. Information on similarities and differences in the physiological properties of isolates obtained from in situ cultivation and standard culti...

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Bibliographic Details
Published in:Microbes and environments
Main Authors: Jung, Dawoon, Aoi, Yoshiteru, Epstein, Slava S.
Format: Text
Language:English
Published: the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2016
Subjects:
Short Communication
Arctic
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5158119/
http://www.ncbi.nlm.nih.gov/pubmed/27682804
https://doi.org/10.1264/jsme2.ME16079
Description
Summary:Standard cultivation fails to grow most microorganisms, whereas in situ cultivation allows for the isolation of comparatively diverse and novel microorganisms. Information on similarities and differences in the physiological properties of isolates obtained from in situ cultivation and standard cultivation is limited. Therefore, we used the arctic sediment samples and compared two culture collections obtained using standard and novel cultivation techniques. Even though there was no temperature selection at the isolation step, isolates from each method showed different reactions to temperature. The results of the present study suggest that isolates from in situ cultivation are more competitive in their natural environment.

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