The genetic architecture of growth and fillet traits in farmed Atlantic salmon (Salmo salar).

Performance and quality traits such as harvest weight, fillet weight and flesh color are of economic importance to the Atlantic salmon aquaculture industry. The genetic factors underlying these traits are of scientific and commercial interest. However, such traits are typically polygenic in nature,...

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Bibliographic Details
Published in:BMC Genetics
Main Authors: Tsai, Hsin Yuan, Hamilton, Alastair, Guy, Derrick R, Tinch, Alan E, Bishop, Stephen C, Houston, Ross D
Format: Article in Journal/Newspaper
Language:English
Published: BioMed Central 2015
Subjects:
Online Access:https://doi.org/10.1186/s12863-015-0215-y
https://pubmed.ncbi.nlm.nih.gov/25985885
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4436873/
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Summary:Performance and quality traits such as harvest weight, fillet weight and flesh color are of economic importance to the Atlantic salmon aquaculture industry. The genetic factors underlying these traits are of scientific and commercial interest. However, such traits are typically polygenic in nature, with the number and size of QTL likely to vary between studies and populations. The aim of this study was to investigate the genetic basis of several growth and fillet traits measured at harvest in a large farmed salmon population by using SNP markers. Due to the marked heterochiasmy in salmonids, an efficient two-stage mapping approach was applied whereby QTL were detected using a sire-based linkage analysis, a sparse SNP marker map and exploiting low rates of recombination, while a subsequent dam-based analysis focused on the significant chromosomes with a denser map to confirm QTL and estimate their position.