id ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.930305
record_format openpolar
spelling ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.930305 2024-09-15T18:28:17+00:00 Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum Wu, Shijie Mi, Tiezhu Zhen, Yu Yu, Elizabeth K Wang, Fuwen Yu, Zhigang Mock, Timothy D 2021 text/tab-separated-values, 84 data points https://doi.pangaea.de/10.1594/PANGAEA.930305 https://doi.org/10.1594/PANGAEA.930305 en eng PANGAEA Wu, Shijie; Mi, Tiezhu; Zhen, Yu; Yu, Elizabeth K; Wang, Fuwen; Yu, Zhigang; Mock, Timothy D (2021): A rise in ROS and EPS production: new insights into the Trichodesmium erythraeum response to ocean acidification. Journal of Phycology, 57(1), 172-182, https://doi.org/10.1111/jpy.13075 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.930305 https://doi.org/10.1594/PANGAEA.930305 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard deviation Aragonite saturation state Bacteria Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved organic particulate per cell Carbonate ion Carbonate system computation flag Carbon dioxide Catalase activity per protein mass Chlorophyll a Chlorophyll a per cell Cyanobacteria Exopolysaccharides Experiment duration Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth rate Laboratory experiment Laboratory strains Maximum photochemical quantum yield of photosystem II Nitrogen dataset 2021 ftpangaea https://doi.org/10.1594/PANGAEA.93030510.1111/jpy.13075 2024-07-24T02:31:34Z The diazotrophic cyanobacterium Trichodesmium is thought to be a major contributor to the new N in the parts of the oligotrophic, subtropical and tropical oceans. In this study physiological and biochemical methods and transcriptome sequencing were used to investigate the influences of ocean acidification (OA) on Trichodesmium erythraeum (T. erythraeum). We presented evidence that OA caused by CO2 slowed the growth rate and physiological activity of T. erythraeum. OA led to reduced development of proportion of the vegetative cells into diazocytes which included up‐regulated genes of nitrogen fixation. Reactive oxygen species (ROS) accumulation was increased due to the disruption of photosynthetic electron transport and decrease in antioxidant enzyme activities under acidified conditions. This study showed that OA increased the amounts of (exopolysaccharides) EPS in T. erythraeum, and the key genes of ribose‐5‐phosphate (R5P) and glycosyltransferases (Tery_3818) were up‐regulated. These results provide new insight into how ROS and EPS of T. erythraeum increase in an acidified future ocean to cope with OA‐imposed stress. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science
institution Open Polar
collection PANGAEA - Data Publisher for Earth & Environmental Science
op_collection_id ftpangaea
language English
topic Alkalinity
total
standard deviation
Aragonite saturation state
Bacteria
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
organic
particulate
per cell
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Catalase activity
per protein mass
Chlorophyll a
Chlorophyll a per cell
Cyanobacteria
Exopolysaccharides
Experiment duration
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth rate
Laboratory experiment
Laboratory strains
Maximum photochemical quantum yield of photosystem II
Nitrogen
spellingShingle Alkalinity
total
standard deviation
Aragonite saturation state
Bacteria
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
organic
particulate
per cell
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Catalase activity
per protein mass
Chlorophyll a
Chlorophyll a per cell
Cyanobacteria
Exopolysaccharides
Experiment duration
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth rate
Laboratory experiment
Laboratory strains
Maximum photochemical quantum yield of photosystem II
Nitrogen
Wu, Shijie
Mi, Tiezhu
Zhen, Yu
Yu, Elizabeth K
Wang, Fuwen
Yu, Zhigang
Mock, Timothy D
Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum
topic_facet Alkalinity
total
standard deviation
Aragonite saturation state
Bacteria
Bicarbonate ion
Bottles or small containers/Aquaria (<20 L)
Calcite saturation state
Calculated using CO2SYS
Calculated using seacarb after Nisumaa et al. (2010)
Carbon
inorganic
dissolved
organic
particulate
per cell
Carbonate ion
Carbonate system computation flag
Carbon dioxide
Catalase activity
per protein mass
Chlorophyll a
Chlorophyll a per cell
Cyanobacteria
Exopolysaccharides
Experiment duration
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Growth rate
Laboratory experiment
Laboratory strains
Maximum photochemical quantum yield of photosystem II
Nitrogen
description The diazotrophic cyanobacterium Trichodesmium is thought to be a major contributor to the new N in the parts of the oligotrophic, subtropical and tropical oceans. In this study physiological and biochemical methods and transcriptome sequencing were used to investigate the influences of ocean acidification (OA) on Trichodesmium erythraeum (T. erythraeum). We presented evidence that OA caused by CO2 slowed the growth rate and physiological activity of T. erythraeum. OA led to reduced development of proportion of the vegetative cells into diazocytes which included up‐regulated genes of nitrogen fixation. Reactive oxygen species (ROS) accumulation was increased due to the disruption of photosynthetic electron transport and decrease in antioxidant enzyme activities under acidified conditions. This study showed that OA increased the amounts of (exopolysaccharides) EPS in T. erythraeum, and the key genes of ribose‐5‐phosphate (R5P) and glycosyltransferases (Tery_3818) were up‐regulated. These results provide new insight into how ROS and EPS of T. erythraeum increase in an acidified future ocean to cope with OA‐imposed stress.
format Dataset
author Wu, Shijie
Mi, Tiezhu
Zhen, Yu
Yu, Elizabeth K
Wang, Fuwen
Yu, Zhigang
Mock, Timothy D
author_facet Wu, Shijie
Mi, Tiezhu
Zhen, Yu
Yu, Elizabeth K
Wang, Fuwen
Yu, Zhigang
Mock, Timothy D
author_sort Wu, Shijie
title Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum
title_short Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum
title_full Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum
title_fullStr Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum
title_full_unstemmed Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum
title_sort seawater carbonate chemistry and ros and eps production of the trichodesmium erythraeum
publisher PANGAEA
publishDate 2021
url https://doi.pangaea.de/10.1594/PANGAEA.930305
https://doi.org/10.1594/PANGAEA.930305
genre Ocean acidification
genre_facet Ocean acidification
op_relation Wu, Shijie; Mi, Tiezhu; Zhen, Yu; Yu, Elizabeth K; Wang, Fuwen; Yu, Zhigang; Mock, Timothy D (2021): A rise in ROS and EPS production: new insights into the Trichodesmium erythraeum response to ocean acidification. Journal of Phycology, 57(1), 172-182, https://doi.org/10.1111/jpy.13075
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html
https://doi.pangaea.de/10.1594/PANGAEA.930305
https://doi.org/10.1594/PANGAEA.930305
op_rights CC-BY-4.0: Creative Commons Attribution 4.0 International
Access constraints: unrestricted
info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1594/PANGAEA.93030510.1111/jpy.13075
_version_ 1810469624104353792