Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum
The diazotrophic cyanobacterium Trichodesmium is thought to be a major contributor to the new N in the parts of the oligotrophic, subtropical and tropical oceans. In this study physiological and biochemical methods and transcriptome sequencing were used to investigate the influences of ocean acidifi...
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ftpangaea:oai:pangaea.de:doi:10.1594/PANGAEA.930305 2024-09-15T18:28:17+00:00 Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum Wu, Shijie Mi, Tiezhu Zhen, Yu Yu, Elizabeth K Wang, Fuwen Yu, Zhigang Mock, Timothy D 2021 text/tab-separated-values, 84 data points https://doi.pangaea.de/10.1594/PANGAEA.930305 https://doi.org/10.1594/PANGAEA.930305 en eng PANGAEA Wu, Shijie; Mi, Tiezhu; Zhen, Yu; Yu, Elizabeth K; Wang, Fuwen; Yu, Zhigang; Mock, Timothy D (2021): A rise in ROS and EPS production: new insights into the Trichodesmium erythraeum response to ocean acidification. Journal of Phycology, 57(1), 172-182, https://doi.org/10.1111/jpy.13075 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.930305 https://doi.org/10.1594/PANGAEA.930305 CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess Alkalinity total standard deviation Aragonite saturation state Bacteria Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved organic particulate per cell Carbonate ion Carbonate system computation flag Carbon dioxide Catalase activity per protein mass Chlorophyll a Chlorophyll a per cell Cyanobacteria Exopolysaccharides Experiment duration Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth rate Laboratory experiment Laboratory strains Maximum photochemical quantum yield of photosystem II Nitrogen dataset 2021 ftpangaea https://doi.org/10.1594/PANGAEA.93030510.1111/jpy.13075 2024-07-24T02:31:34Z The diazotrophic cyanobacterium Trichodesmium is thought to be a major contributor to the new N in the parts of the oligotrophic, subtropical and tropical oceans. In this study physiological and biochemical methods and transcriptome sequencing were used to investigate the influences of ocean acidification (OA) on Trichodesmium erythraeum (T. erythraeum). We presented evidence that OA caused by CO2 slowed the growth rate and physiological activity of T. erythraeum. OA led to reduced development of proportion of the vegetative cells into diazocytes which included up‐regulated genes of nitrogen fixation. Reactive oxygen species (ROS) accumulation was increased due to the disruption of photosynthetic electron transport and decrease in antioxidant enzyme activities under acidified conditions. This study showed that OA increased the amounts of (exopolysaccharides) EPS in T. erythraeum, and the key genes of ribose‐5‐phosphate (R5P) and glycosyltransferases (Tery_3818) were up‐regulated. These results provide new insight into how ROS and EPS of T. erythraeum increase in an acidified future ocean to cope with OA‐imposed stress. Dataset Ocean acidification PANGAEA - Data Publisher for Earth & Environmental Science |
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Open Polar |
collection |
PANGAEA - Data Publisher for Earth & Environmental Science |
op_collection_id |
ftpangaea |
language |
English |
topic |
Alkalinity total standard deviation Aragonite saturation state Bacteria Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved organic particulate per cell Carbonate ion Carbonate system computation flag Carbon dioxide Catalase activity per protein mass Chlorophyll a Chlorophyll a per cell Cyanobacteria Exopolysaccharides Experiment duration Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth rate Laboratory experiment Laboratory strains Maximum photochemical quantum yield of photosystem II Nitrogen |
spellingShingle |
Alkalinity total standard deviation Aragonite saturation state Bacteria Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved organic particulate per cell Carbonate ion Carbonate system computation flag Carbon dioxide Catalase activity per protein mass Chlorophyll a Chlorophyll a per cell Cyanobacteria Exopolysaccharides Experiment duration Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth rate Laboratory experiment Laboratory strains Maximum photochemical quantum yield of photosystem II Nitrogen Wu, Shijie Mi, Tiezhu Zhen, Yu Yu, Elizabeth K Wang, Fuwen Yu, Zhigang Mock, Timothy D Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum |
topic_facet |
Alkalinity total standard deviation Aragonite saturation state Bacteria Bicarbonate ion Bottles or small containers/Aquaria (<20 L) Calcite saturation state Calculated using CO2SYS Calculated using seacarb after Nisumaa et al. (2010) Carbon inorganic dissolved organic particulate per cell Carbonate ion Carbonate system computation flag Carbon dioxide Catalase activity per protein mass Chlorophyll a Chlorophyll a per cell Cyanobacteria Exopolysaccharides Experiment duration Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Growth rate Laboratory experiment Laboratory strains Maximum photochemical quantum yield of photosystem II Nitrogen |
description |
The diazotrophic cyanobacterium Trichodesmium is thought to be a major contributor to the new N in the parts of the oligotrophic, subtropical and tropical oceans. In this study physiological and biochemical methods and transcriptome sequencing were used to investigate the influences of ocean acidification (OA) on Trichodesmium erythraeum (T. erythraeum). We presented evidence that OA caused by CO2 slowed the growth rate and physiological activity of T. erythraeum. OA led to reduced development of proportion of the vegetative cells into diazocytes which included up‐regulated genes of nitrogen fixation. Reactive oxygen species (ROS) accumulation was increased due to the disruption of photosynthetic electron transport and decrease in antioxidant enzyme activities under acidified conditions. This study showed that OA increased the amounts of (exopolysaccharides) EPS in T. erythraeum, and the key genes of ribose‐5‐phosphate (R5P) and glycosyltransferases (Tery_3818) were up‐regulated. These results provide new insight into how ROS and EPS of T. erythraeum increase in an acidified future ocean to cope with OA‐imposed stress. |
format |
Dataset |
author |
Wu, Shijie Mi, Tiezhu Zhen, Yu Yu, Elizabeth K Wang, Fuwen Yu, Zhigang Mock, Timothy D |
author_facet |
Wu, Shijie Mi, Tiezhu Zhen, Yu Yu, Elizabeth K Wang, Fuwen Yu, Zhigang Mock, Timothy D |
author_sort |
Wu, Shijie |
title |
Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum |
title_short |
Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum |
title_full |
Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum |
title_fullStr |
Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum |
title_full_unstemmed |
Seawater carbonate chemistry and ROS and EPS production of the Trichodesmium erythraeum |
title_sort |
seawater carbonate chemistry and ros and eps production of the trichodesmium erythraeum |
publisher |
PANGAEA |
publishDate |
2021 |
url |
https://doi.pangaea.de/10.1594/PANGAEA.930305 https://doi.org/10.1594/PANGAEA.930305 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
Wu, Shijie; Mi, Tiezhu; Zhen, Yu; Yu, Elizabeth K; Wang, Fuwen; Yu, Zhigang; Mock, Timothy D (2021): A rise in ROS and EPS production: new insights into the Trichodesmium erythraeum response to ocean acidification. Journal of Phycology, 57(1), 172-182, https://doi.org/10.1111/jpy.13075 Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse; Orr, James (2021): seacarb: seawater carbonate chemistry with R. R package version 3.2.16. https://cran.r-project.org/web/packages/seacarb/index.html https://doi.pangaea.de/10.1594/PANGAEA.930305 https://doi.org/10.1594/PANGAEA.930305 |
op_rights |
CC-BY-4.0: Creative Commons Attribution 4.0 International Access constraints: unrestricted info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1594/PANGAEA.93030510.1111/jpy.13075 |
_version_ |
1810469624104353792 |