Pathways to Carbon Liberation: A Systems Approach to Understanding Carbon Transformations and Losses from Thawing Permafrost

Our objective in this project was to discover how microbial communities mediate the fate of carbon in thawing permafrost under climate change. We proposed a systems approach integrating (a) molecular microbial and viral ecology, (b) molecular organic chemistry and stable and radiocarbon isotopes, an...

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Bibliographic Details
Main Authors: Saleska, Scott, Rich, Virginia, Tyson, Gene @., Sullivan, Mattew, Chanton, Jeffrey, Crill, Patrick, Frolking, Steve, Li, Changsheng, Varner, Ruth, Hurst, Greg, VerBerkmoes, Nathan
Language:unknown
Published: 2019
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Online Access:http://www.osti.gov/servlets/purl/1506685
https://www.osti.gov/biblio/1506685
https://doi.org/10.2172/1506685
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Summary:Our objective in this project was to discover how microbial communities mediate the fate of carbon in thawing permafrost under climate change. We proposed a systems approach integrating (a) molecular microbial and viral ecology, (b) molecular organic chemistry and stable and radiocarbon isotopes, and (c) state-of-the-art modeling, along a chronosequence of permafrost thaw in subarctic Sweden. The fate of carbon (C) in thawing permafrost is an outstanding challenge of modern biogeochemistry and climate change. Permafrost C pools are large (~1700 PgC), and C dynamics of thawing permafrost complex: old C decomposes as it is liberated from thawing permafrost as CO 2 or CH 4 , with a significant fraction cycling through lake sediments, even as new C accumulates due to thaw-initiated ecological succession. Our work is allowing better prediction of the net effect of these processes. Microbes mediate C dynamics in thawing permafrost, but a mechanistic understanding of how to scale microbial population dynamics, genomic potential, and expression to ecosystem-scale processes has been missing. A key question was: What is the interplay of microbial communities and organic matter chemical structure in the decomposition/preservation of organic C across a thaw gradient? And intriguingly, what (if any) is the role of phage (viruses that infect prokaryotic cells) in mediating these processes? Viruses appear to play a large role in driving oceanic function, but these phenomena are virtually unstudied in terrestrial systems. This endeavor linking microbial and viral dynamics, organic geochemistry and trace gas production will improve models of C cycling in permafrost systems, and clarify the fate of C under future climates. Technical Approach – We conducted a study at Stordalen Mire, Sweden, along a permafrost thaw chronosequence encompassing permafrost palsas and their initial collapse stage, thawing bog sites (dominated by Sphagnum moss), fully-thawed and inundated fen sites (dominated by Eriophorum spp or Carex spp.), and ...