Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements

Since the industrial revolution 30% of the anthropogenic CO2 is absorbed by oceans, resulting in ocean acidification, which is a threat to calcifying algae. As a result, there has been profound interest in the study of calcifying algae, because of their important role in the global carbon cycle. The...

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Published in:Biosensors and Bioelectronics
Main Authors: de Bruijn, Douwe S., ter Braak, Paul M., Van de Waal, Dedmer B., Olthuis, Wouter, van den Berg, Albert
Format: Article in Journal/Newspaper
Language:English
Published: 2021
Subjects:
Online Access:https://pure.knaw.nl/portal/en/publications/aef0d454-d509-4620-89d0-a76e5a076bb6
https://doi.org/10.1016/j.bios.2020.112808
https://hdl.handle.net/20.500.11755/aef0d454-d509-4620-89d0-a76e5a076bb6
https://pure.knaw.nl/ws/files/93085443/7068_deBruijn.pdf
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spelling ftknawnlpublic:oai:pure.knaw.nl:publications/aef0d454-d509-4620-89d0-a76e5a076bb6 2024-09-15T18:28:17+00:00 Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements de Bruijn, Douwe S. ter Braak, Paul M. Van de Waal, Dedmer B. Olthuis, Wouter van den Berg, Albert 2021-02-01 application/pdf https://pure.knaw.nl/portal/en/publications/aef0d454-d509-4620-89d0-a76e5a076bb6 https://doi.org/10.1016/j.bios.2020.112808 https://hdl.handle.net/20.500.11755/aef0d454-d509-4620-89d0-a76e5a076bb6 https://pure.knaw.nl/ws/files/93085443/7068_deBruijn.pdf eng eng https://pure.knaw.nl/portal/en/publications/aef0d454-d509-4620-89d0-a76e5a076bb6 info:eu-repo/semantics/openAccess de Bruijn , D S , ter Braak , P M , Van de Waal , D B , Olthuis , W & van den Berg , A 2021 , ' Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements ' , Biosensors and Bioelectronics , vol. 173 , 112808 . https://doi.org/10.1016/j.bios.2020.112808 Flow cytometry Electrical impedance spectroscopy Single-cell characterization Algae Calcification national Plan_S-Compliant-TA article 2021 ftknawnlpublic https://doi.org/10.1016/j.bios.2020.11280820.500.11755/aef0d454-d509-4620-89d0-a76e5a076bb6 2024-07-29T23:40:18Z Since the industrial revolution 30% of the anthropogenic CO2 is absorbed by oceans, resulting in ocean acidification, which is a threat to calcifying algae. As a result, there has been profound interest in the study of calcifying algae, because of their important role in the global carbon cycle. The species studied, coccolithophore Emiliania huxleyi, is considered to be globally the single most dominant calcifying algae, which creates a unique exoskeleton from inorganic calcium carbonate platelets. The PIC (particulate inorganic carbon): POC (particulate organic carbon) ratio describes the relative amount of inorganic carbon in the algae and is a critical parameter in the ocean carbon cycle. In this research we explore the use of microfluidic single-cell impedance spectroscopy in the field of calcifying algae. Microfluidic impedance spectroscopy enables us to characterize single-cell electrical properties in a non-invasive and label-free way. We use the ratio of the impedance at high frequency vs. low frequency, known as opacity, to discriminate between calcified coccolithophores and coccolithophores with a calcite exoskeleton dissolved by acidification (decalcified). We have demonstrated that using opacity we can discriminate between calcified and decalcified coccolithophores with an accuracy of 94.1%. We have observed a correlation between the measured opacity and the cell height in the channel, which is supported by FEM simulations. The difference in cell density between calcified and decalcified cells can explain the difference in cell height and therefore the measured opacity. Article in Journal/Newspaper Ocean acidification Royal Netherlands Academy of Arts and Sciences Research Portal (KNAW) Biosensors and Bioelectronics 173 112808
institution Open Polar
collection Royal Netherlands Academy of Arts and Sciences Research Portal (KNAW)
op_collection_id ftknawnlpublic
language English
topic Flow cytometry
Electrical impedance spectroscopy
Single-cell characterization
Algae
Calcification
national
Plan_S-Compliant-TA
spellingShingle Flow cytometry
Electrical impedance spectroscopy
Single-cell characterization
Algae
Calcification
national
Plan_S-Compliant-TA
de Bruijn, Douwe S.
ter Braak, Paul M.
Van de Waal, Dedmer B.
Olthuis, Wouter
van den Berg, Albert
Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements
topic_facet Flow cytometry
Electrical impedance spectroscopy
Single-cell characterization
Algae
Calcification
national
Plan_S-Compliant-TA
description Since the industrial revolution 30% of the anthropogenic CO2 is absorbed by oceans, resulting in ocean acidification, which is a threat to calcifying algae. As a result, there has been profound interest in the study of calcifying algae, because of their important role in the global carbon cycle. The species studied, coccolithophore Emiliania huxleyi, is considered to be globally the single most dominant calcifying algae, which creates a unique exoskeleton from inorganic calcium carbonate platelets. The PIC (particulate inorganic carbon): POC (particulate organic carbon) ratio describes the relative amount of inorganic carbon in the algae and is a critical parameter in the ocean carbon cycle. In this research we explore the use of microfluidic single-cell impedance spectroscopy in the field of calcifying algae. Microfluidic impedance spectroscopy enables us to characterize single-cell electrical properties in a non-invasive and label-free way. We use the ratio of the impedance at high frequency vs. low frequency, known as opacity, to discriminate between calcified coccolithophores and coccolithophores with a calcite exoskeleton dissolved by acidification (decalcified). We have demonstrated that using opacity we can discriminate between calcified and decalcified coccolithophores with an accuracy of 94.1%. We have observed a correlation between the measured opacity and the cell height in the channel, which is supported by FEM simulations. The difference in cell density between calcified and decalcified cells can explain the difference in cell height and therefore the measured opacity.
format Article in Journal/Newspaper
author de Bruijn, Douwe S.
ter Braak, Paul M.
Van de Waal, Dedmer B.
Olthuis, Wouter
van den Berg, Albert
author_facet de Bruijn, Douwe S.
ter Braak, Paul M.
Van de Waal, Dedmer B.
Olthuis, Wouter
van den Berg, Albert
author_sort de Bruijn, Douwe S.
title Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements
title_short Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements
title_full Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements
title_fullStr Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements
title_full_unstemmed Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements
title_sort coccolithophore calcification studied by single-cell impedance cytometry: towards single-cell pic:poc measurements
publishDate 2021
url https://pure.knaw.nl/portal/en/publications/aef0d454-d509-4620-89d0-a76e5a076bb6
https://doi.org/10.1016/j.bios.2020.112808
https://hdl.handle.net/20.500.11755/aef0d454-d509-4620-89d0-a76e5a076bb6
https://pure.knaw.nl/ws/files/93085443/7068_deBruijn.pdf
genre Ocean acidification
genre_facet Ocean acidification
op_source de Bruijn , D S , ter Braak , P M , Van de Waal , D B , Olthuis , W & van den Berg , A 2021 , ' Coccolithophore calcification studied by single-cell impedance cytometry: Towards single-cell PIC:POC measurements ' , Biosensors and Bioelectronics , vol. 173 , 112808 . https://doi.org/10.1016/j.bios.2020.112808
op_relation https://pure.knaw.nl/portal/en/publications/aef0d454-d509-4620-89d0-a76e5a076bb6
op_rights info:eu-repo/semantics/openAccess
op_doi https://doi.org/10.1016/j.bios.2020.11280820.500.11755/aef0d454-d509-4620-89d0-a76e5a076bb6
container_title Biosensors and Bioelectronics
container_volume 173
container_start_page 112808
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