NARWHAL, a primary analysis pipeline for NGS data
Summary: The NARWHAL software pipeline has been developed to automate the primary analysis of Illumina sequencing data. This pipeline combines a new and flexible de-multiplexing tool with open source aligners and automated quality assessment. The entire pipeline can be run using only one simple samp...
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2011
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fthighwire:oai:open-archive.highwire.org:bioinfo:btr613v1 2023-05-15T17:14:11+02:00 NARWHAL, a primary analysis pipeline for NGS data Brouwer, R.W.W. van den Hout, M.C.G.N. Grosveld, F.G. van IJcken, W.F.J. 2011-11-08 23:02:56.0 text/html http://bioinformatics.oxfordjournals.org/cgi/content/short/btr613v1 https://doi.org/10.1093/bioinformatics/btr613 en eng Oxford University Press http://bioinformatics.oxfordjournals.org/cgi/content/short/btr613v1 http://dx.doi.org/10.1093/bioinformatics/btr613 Copyright (C) 2011, Oxford University Press APPLICATIONS NOTE TEXT 2011 fthighwire https://doi.org/10.1093/bioinformatics/btr613 2015-03-01T01:29:59Z Summary: The NARWHAL software pipeline has been developed to automate the primary analysis of Illumina sequencing data. This pipeline combines a new and flexible de-multiplexing tool with open source aligners and automated quality assessment. The entire pipeline can be run using only one simple sample-sheet for diverse sequencing applications. Narwhal creates a sample oriented data structure and outperforms existing tools in speed. Availability: https://trac.nbic.nl/narwhal/ Supplementary information: Supplementary information is available at https://trac.nbic.nl/narwhal/ Contact: w.vanijcken@erasmusmc.nl Text narwhal* HighWire Press (Stanford University) Bioinformatics 28 2 284 285 |
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HighWire Press (Stanford University) |
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English |
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APPLICATIONS NOTE |
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APPLICATIONS NOTE Brouwer, R.W.W. van den Hout, M.C.G.N. Grosveld, F.G. van IJcken, W.F.J. NARWHAL, a primary analysis pipeline for NGS data |
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APPLICATIONS NOTE |
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Summary: The NARWHAL software pipeline has been developed to automate the primary analysis of Illumina sequencing data. This pipeline combines a new and flexible de-multiplexing tool with open source aligners and automated quality assessment. The entire pipeline can be run using only one simple sample-sheet for diverse sequencing applications. Narwhal creates a sample oriented data structure and outperforms existing tools in speed. Availability: https://trac.nbic.nl/narwhal/ Supplementary information: Supplementary information is available at https://trac.nbic.nl/narwhal/ Contact: w.vanijcken@erasmusmc.nl |
format |
Text |
author |
Brouwer, R.W.W. van den Hout, M.C.G.N. Grosveld, F.G. van IJcken, W.F.J. |
author_facet |
Brouwer, R.W.W. van den Hout, M.C.G.N. Grosveld, F.G. van IJcken, W.F.J. |
author_sort |
Brouwer, R.W.W. |
title |
NARWHAL, a primary analysis pipeline for NGS data |
title_short |
NARWHAL, a primary analysis pipeline for NGS data |
title_full |
NARWHAL, a primary analysis pipeline for NGS data |
title_fullStr |
NARWHAL, a primary analysis pipeline for NGS data |
title_full_unstemmed |
NARWHAL, a primary analysis pipeline for NGS data |
title_sort |
narwhal, a primary analysis pipeline for ngs data |
publisher |
Oxford University Press |
publishDate |
2011 |
url |
http://bioinformatics.oxfordjournals.org/cgi/content/short/btr613v1 https://doi.org/10.1093/bioinformatics/btr613 |
genre |
narwhal* |
genre_facet |
narwhal* |
op_relation |
http://bioinformatics.oxfordjournals.org/cgi/content/short/btr613v1 http://dx.doi.org/10.1093/bioinformatics/btr613 |
op_rights |
Copyright (C) 2011, Oxford University Press |
op_doi |
https://doi.org/10.1093/bioinformatics/btr613 |
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Bioinformatics |
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28 |
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2 |
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284 |
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285 |
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1766071464117665792 |