Filtered sequencing data (MOTUs) for fungal metabarcode

This table contains filtered MOTUs for the fungal metabarcode. Amplicons were amplified using ITS5 : 5'-GGAAGTAAAAGTCGTAACAAGG-3' (White et al. 1990) and 5.8S_fungi : 5'- CAAGAGATCCGTTGTTGAAAGTT-3' primers (Epp et al. 2012). Sequences were obtained by a 2 x 250 bp paired-end sequ...

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Main Authors: Pansu, Johan, Winkworth, Richard C., Hennion, Françoise, Gielly, Ludovic, Taberlet, Pierre, Choler, Philippe
Format: Report
Language:unknown
Published: 2015
Subjects:
Online Access:http://hdl.handle.net/10255/dryad.93607
https://doi.org/10.5061/dryad.t8534/4
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spelling ftdryad:oai:v1.datadryad.org:10255/dryad.93607 2023-05-15T14:00:52+02:00 Filtered sequencing data (MOTUs) for fungal metabarcode Pansu, Johan Winkworth, Richard C. Hennion, Françoise Gielly, Ludovic Taberlet, Pierre Choler, Philippe Kerguelen Islands Sub-Antarctic Islands 2015-07-28T13:41:50Z 412558 3213 http://hdl.handle.net/10255/dryad.93607 https://doi.org/10.5061/dryad.t8534/4 unknown doi:10.5061/dryad.t8534 doi:10.5061/dryad.t8534/4 http://hdl.handle.net/10255/dryad.93607 http://creativecommons.org/publicdomain/zero/1.0/ CC0 PDM Environmental DNA Invasive species Metabarcoding Soil communities Dataset untilArticleAppears 2015 ftdryad https://doi.org/10.5061/dryad.t8534/4 https://doi.org/10.5061/dryad.t8534 2020-01-01T15:22:51Z This table contains filtered MOTUs for the fungal metabarcode. Amplicons were amplified using ITS5 : 5'-GGAAGTAAAAGTCGTAACAAGG-3' (White et al. 1990) and 5.8S_fungi : 5'- CAAGAGATCCGTTGTTGAAAGTT-3' primers (Epp et al. 2012). Sequences were obtained by a 2 x 250 bp paired-end sequencing on Illumina MiSeq platform. Data filtering and MOTUs clustering were performed according to the procedure described in the supplementary materials of Pansu et al. (2015): 'Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago'. Report Antarc* Antarctic Kerguelen Islands Dryad Digital Repository (Duke University) Antarctic Kerguelen Kerguelen Islands
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic Environmental DNA
Invasive species
Metabarcoding
Soil communities
spellingShingle Environmental DNA
Invasive species
Metabarcoding
Soil communities
Pansu, Johan
Winkworth, Richard C.
Hennion, Françoise
Gielly, Ludovic
Taberlet, Pierre
Choler, Philippe
Filtered sequencing data (MOTUs) for fungal metabarcode
topic_facet Environmental DNA
Invasive species
Metabarcoding
Soil communities
description This table contains filtered MOTUs for the fungal metabarcode. Amplicons were amplified using ITS5 : 5'-GGAAGTAAAAGTCGTAACAAGG-3' (White et al. 1990) and 5.8S_fungi : 5'- CAAGAGATCCGTTGTTGAAAGTT-3' primers (Epp et al. 2012). Sequences were obtained by a 2 x 250 bp paired-end sequencing on Illumina MiSeq platform. Data filtering and MOTUs clustering were performed according to the procedure described in the supplementary materials of Pansu et al. (2015): 'Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago'.
format Report
author Pansu, Johan
Winkworth, Richard C.
Hennion, Françoise
Gielly, Ludovic
Taberlet, Pierre
Choler, Philippe
author_facet Pansu, Johan
Winkworth, Richard C.
Hennion, Françoise
Gielly, Ludovic
Taberlet, Pierre
Choler, Philippe
author_sort Pansu, Johan
title Filtered sequencing data (MOTUs) for fungal metabarcode
title_short Filtered sequencing data (MOTUs) for fungal metabarcode
title_full Filtered sequencing data (MOTUs) for fungal metabarcode
title_fullStr Filtered sequencing data (MOTUs) for fungal metabarcode
title_full_unstemmed Filtered sequencing data (MOTUs) for fungal metabarcode
title_sort filtered sequencing data (motus) for fungal metabarcode
publishDate 2015
url http://hdl.handle.net/10255/dryad.93607
https://doi.org/10.5061/dryad.t8534/4
op_coverage Kerguelen Islands
Sub-Antarctic Islands
geographic Antarctic
Kerguelen
Kerguelen Islands
geographic_facet Antarctic
Kerguelen
Kerguelen Islands
genre Antarc*
Antarctic
Kerguelen Islands
genre_facet Antarc*
Antarctic
Kerguelen Islands
op_relation doi:10.5061/dryad.t8534
doi:10.5061/dryad.t8534/4
http://hdl.handle.net/10255/dryad.93607
op_rights http://creativecommons.org/publicdomain/zero/1.0/
op_rightsnorm CC0
PDM
op_doi https://doi.org/10.5061/dryad.t8534/4
https://doi.org/10.5061/dryad.t8534
_version_ 1766270258580029440