SRX814890

Sequence files of Colobanthus quitensis transcriptome grown in two different climatic conditions. Sequences were obtained using Illumina Platform Hi-Seq2000. Assembly: Paired-end reads were put through the sequencing pipeline consisting of base calling using Illumina Pipeline, trimming for quality w...

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Bibliographic Details
Main Authors: Bertini, Laura, Proietti, Silvia, Caruso, Carla
Format: Dataset
Language:unknown
Published: 2015
Subjects:
Transcriptomics
Assembly
Genetic resource
RNA-Seq
Climate Change
Antarctic
Arctowski
King George Island
Antarc*
Online Access:http://hdl.handle.net/10255/dryad.79150
https://doi.org/10.5061/dryad.jp1mk/1
id ftdryad:oai:v1.datadryad.org:10255/dryad.79150
record_format openpolar
spelling ftdryad:oai:v1.datadryad.org:10255/dryad.79150 2023-05-15T13:55:49+02:00 SRX814890 Bertini, Laura Proietti, Silvia Caruso, Carla Arctowski base King George Island Maritime Antarctic 2015-04-29T17:22:20Z http://hdl.handle.net/10255/dryad.79150 https://doi.org/10.5061/dryad.jp1mk/1 unknown doi:10.5061/dryad.jp1mk doi:10.5061/dryad.jp1mk/1 http://hdl.handle.net/10255/dryad.79150 Transcriptomics Assembly Genetic resource RNA-Seq Climate Change Dataset 2015 ftdryad https://doi.org/10.5061/dryad.jp1mk/1 https://doi.org/10.5061/dryad.jp1mk 2020-01-01T15:15:52Z Sequence files of Colobanthus quitensis transcriptome grown in two different climatic conditions. Sequences were obtained using Illumina Platform Hi-Seq2000. Assembly: Paired-end reads were put through the sequencing pipeline consisting of base calling using Illumina Pipeline, trimming for quality with ERNE and from adapters with Cutadapt software. High quality reads from all libraries combined were then assembled into contigs using the de novo assembler toolbox of CLC Genomics Workbench version 6.5.1 setting default parameters but ‘word size’ to 64. Dataset Antarc* Antarctic King George Island Dryad Digital Repository (Duke University) Antarctic Arctowski ENVELOPE(-58.467,-58.467,-62.167,-62.167) King George Island
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic Transcriptomics
Assembly
Genetic resource
RNA-Seq
Climate Change
spellingShingle Transcriptomics
Assembly
Genetic resource
RNA-Seq
Climate Change
Bertini, Laura
Proietti, Silvia
Caruso, Carla
SRX814890
topic_facet Transcriptomics
Assembly
Genetic resource
RNA-Seq
Climate Change
description Sequence files of Colobanthus quitensis transcriptome grown in two different climatic conditions. Sequences were obtained using Illumina Platform Hi-Seq2000. Assembly: Paired-end reads were put through the sequencing pipeline consisting of base calling using Illumina Pipeline, trimming for quality with ERNE and from adapters with Cutadapt software. High quality reads from all libraries combined were then assembled into contigs using the de novo assembler toolbox of CLC Genomics Workbench version 6.5.1 setting default parameters but ‘word size’ to 64.
format Dataset
author Bertini, Laura
Proietti, Silvia
Caruso, Carla
author_facet Bertini, Laura
Proietti, Silvia
Caruso, Carla
author_sort Bertini, Laura
title SRX814890
title_short SRX814890
title_full SRX814890
title_fullStr SRX814890
title_full_unstemmed SRX814890
title_sort srx814890
publishDate 2015
url http://hdl.handle.net/10255/dryad.79150
https://doi.org/10.5061/dryad.jp1mk/1
op_coverage Arctowski base
King George Island
Maritime Antarctic
long_lat ENVELOPE(-58.467,-58.467,-62.167,-62.167)
geographic Antarctic
Arctowski
King George Island
geographic_facet Antarctic
Arctowski
King George Island
genre Antarc*
Antarctic
King George Island
genre_facet Antarc*
Antarctic
King George Island
op_relation doi:10.5061/dryad.jp1mk
doi:10.5061/dryad.jp1mk/1
http://hdl.handle.net/10255/dryad.79150
op_doi https://doi.org/10.5061/dryad.jp1mk/1
https://doi.org/10.5061/dryad.jp1mk
_version_ 1766262720153255936

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