SRX814890

Sequence files of Colobanthus quitensis transcriptome grown in two different climatic conditions. Sequences were obtained using Illumina Platform Hi-Seq2000. Assembly: Paired-end reads were put through the sequencing pipeline consisting of base calling using Illumina Pipeline, trimming for quality w...

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Bibliographic Details
Main Authors: Bertini, Laura, Proietti, Silvia, Caruso, Carla
Format: Dataset
Language:unknown
Published: 2015
Subjects:
Transcriptomics
Assembly
Genetic resource
RNA-Seq
Climate Change
Antarctic
Arctowski
King George Island
Antarc*
Online Access:http://hdl.handle.net/10255/dryad.79150
https://doi.org/10.5061/dryad.jp1mk/1
Description
Summary:Sequence files of Colobanthus quitensis transcriptome grown in two different climatic conditions. Sequences were obtained using Illumina Platform Hi-Seq2000. Assembly: Paired-end reads were put through the sequencing pipeline consisting of base calling using Illumina Pipeline, trimming for quality with ERNE and from adapters with Cutadapt software. High quality reads from all libraries combined were then assembled into contigs using the de novo assembler toolbox of CLC Genomics Workbench version 6.5.1 setting default parameters but ‘word size’ to 64.

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