R script: 4_RAD_Parse_blast_xml_Pp_Dd

This script was used to summarize Blast hits results from Blast2GO (number of hits belonging to each organism) and to retrieve and export in fasta format the whole sequence from the best hits (these longer sequences were subsequently used in Blast2GO).

Bibliographic Details
Main Authors: Viricel, Amélia, Pante, Eric, Dabin, Willy, Simon-Bouhet, Benoît
Format: Report
Language:unknown
Published: 2013
Subjects:
Phylogenetic Theory and Methods
Genomics/Proteomics
Mammals
Northeast Atlantic
Online Access:http://hdl.handle.net/10255/dryad.56795
https://doi.org/10.5061/dryad.mk364/5
Description
Summary:This script was used to summarize Blast hits results from Blast2GO (number of hits belonging to each organism) and to retrieve and export in fasta format the whole sequence from the best hits (these longer sequences were subsequently used in Blast2GO).

Similar Items