Sequence count data for all CpGs

This file contains the count of sequences, e.g. the number of restriction enzyme cut sites of the same sequence, that was used to calculate DNAm scores for all unfiltered CpGs. This is a final count of "CCGGG" (methylated) + "GGG" (unmethylated) sequence ends. This value can be u...

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Bibliographic Details
Main Authors: De Paoli-Iseppi, Ricardo, Deagle, Bruce, Polanowski, Andrea, McMahon, Clive, Dickinson, Joanne, Hindell, Mark, Jarman, Simon
Format: Dataset
Language:unknown
Published: 2018
Subjects:
Age
Birds
DNA methylation
Epigenetics
DREAM
Flinders
Fisher Island
Online Access:http://hdl.handle.net/10255/dryad.197017
https://doi.org/10.5061/dryad.n4h3672/2
id ftdryad:oai:v1.datadryad.org:10255/dryad.197017
record_format openpolar
spelling ftdryad:oai:v1.datadryad.org:10255/dryad.197017 2023-05-15T16:17:22+02:00 Sequence count data for all CpGs De Paoli-Iseppi, Ricardo Deagle, Bruce Polanowski, Andrea McMahon, Clive Dickinson, Joanne Hindell, Mark Jarman, Simon Flinders Island Fisher Island Tasmania 2018-12-18T18:04:01Z 18008210 http://hdl.handle.net/10255/dryad.197017 https://doi.org/10.5061/dryad.n4h3672/2 unknown doi:10.5061/dryad.n4h3672 doi:10.5061/dryad.n4h3672/2 http://hdl.handle.net/10255/dryad.197017 http://creativecommons.org/publicdomain/zero/1.0/ CC0 PDM Age Birds DNA methylation Epigenetics DREAM Dataset 2018 ftdryad https://doi.org/10.5061/dryad.n4h3672/2 https://doi.org/10.5061/dryad.n4h3672 2020-01-01T16:18:22Z This file contains the count of sequences, e.g. the number of restriction enzyme cut sites of the same sequence, that was used to calculate DNAm scores for all unfiltered CpGs. This is a final count of "CCGGG" (methylated) + "GGG" (unmethylated) sequence ends. This value can be used to filter CpG sites based on 'read depth'. Dataset Fisher Island Dryad Digital Repository (Duke University) Flinders ENVELOPE(-66.667,-66.667,-69.267,-69.267)
institution Open Polar
collection Dryad Digital Repository (Duke University)
op_collection_id ftdryad
language unknown
topic Age
Birds
DNA methylation
Epigenetics
DREAM
spellingShingle Age
Birds
DNA methylation
Epigenetics
DREAM
De Paoli-Iseppi, Ricardo
Deagle, Bruce
Polanowski, Andrea
McMahon, Clive
Dickinson, Joanne
Hindell, Mark
Jarman, Simon
Sequence count data for all CpGs
topic_facet Age
Birds
DNA methylation
Epigenetics
DREAM
description This file contains the count of sequences, e.g. the number of restriction enzyme cut sites of the same sequence, that was used to calculate DNAm scores for all unfiltered CpGs. This is a final count of "CCGGG" (methylated) + "GGG" (unmethylated) sequence ends. This value can be used to filter CpG sites based on 'read depth'.
format Dataset
author De Paoli-Iseppi, Ricardo
Deagle, Bruce
Polanowski, Andrea
McMahon, Clive
Dickinson, Joanne
Hindell, Mark
Jarman, Simon
author_facet De Paoli-Iseppi, Ricardo
Deagle, Bruce
Polanowski, Andrea
McMahon, Clive
Dickinson, Joanne
Hindell, Mark
Jarman, Simon
author_sort De Paoli-Iseppi, Ricardo
title Sequence count data for all CpGs
title_short Sequence count data for all CpGs
title_full Sequence count data for all CpGs
title_fullStr Sequence count data for all CpGs
title_full_unstemmed Sequence count data for all CpGs
title_sort sequence count data for all cpgs
publishDate 2018
url http://hdl.handle.net/10255/dryad.197017
https://doi.org/10.5061/dryad.n4h3672/2
op_coverage Flinders Island
Fisher Island
Tasmania
long_lat ENVELOPE(-66.667,-66.667,-69.267,-69.267)
geographic Flinders
geographic_facet Flinders
genre Fisher Island
genre_facet Fisher Island
op_relation doi:10.5061/dryad.n4h3672
doi:10.5061/dryad.n4h3672/2
http://hdl.handle.net/10255/dryad.197017
op_rights http://creativecommons.org/publicdomain/zero/1.0/
op_rightsnorm CC0
PDM
op_doi https://doi.org/10.5061/dryad.n4h3672/2
https://doi.org/10.5061/dryad.n4h3672
_version_ 1766003215858401280

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