Sequence count data for all CpGs

This file contains the count of sequences, e.g. the number of restriction enzyme cut sites of the same sequence, that was used to calculate DNAm scores for all unfiltered CpGs. This is a final count of "CCGGG" (methylated) + "GGG" (unmethylated) sequence ends. This value can be u...

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Bibliographic Details
Main Authors: De Paoli-Iseppi, Ricardo, Deagle, Bruce, Polanowski, Andrea, McMahon, Clive, Dickinson, Joanne, Hindell, Mark, Jarman, Simon
Format: Dataset
Language:unknown
Published: 2018
Subjects:
Age
Birds
DNA methylation
Epigenetics
DREAM
Flinders
Fisher Island
Online Access:http://hdl.handle.net/10255/dryad.197017
https://doi.org/10.5061/dryad.n4h3672/2
Description
Summary:This file contains the count of sequences, e.g. the number of restriction enzyme cut sites of the same sequence, that was used to calculate DNAm scores for all unfiltered CpGs. This is a final count of "CCGGG" (methylated) + "GGG" (unmethylated) sequence ends. This value can be used to filter CpG sites based on 'read depth'.

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