Repeat and linkage filtered VCF file

The repeat-filtered SNP dataset was further filtered to minimise the effect of linkage by including only SNPs that were spaced >100-kb apart on a scaffold, retaining the genotypes for 115 individuals at 1,346 sites.

Bibliographic Details
Main Authors: Foote, Andrew D., Morin, Phillip A.
Format: Report
Language:unknown
Published: 2016
Subjects:
RADseq
SNP
killer whale
Pacific
Killer Whale
Marion Island
North Atlantic
Killer whale
Online Access:http://hdl.handle.net/10255/dryad.119272
https://doi.org/10.5061/dryad.803q8/2
Description
Summary:The repeat-filtered SNP dataset was further filtered to minimise the effect of linkage by including only SNPs that were spaced >100-kb apart on a scaffold, retaining the genotypes for 115 individuals at 1,346 sites.

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