MESMO 3: Flexible phytoplankton stoichiometry and refractory dissolved organic matter

We describe the third version of Minnesota Earth System Model for Ocean biogeochemistry (MESMO 3), an Earth system model of intermediate complexity, with a dynamical ocean, dynamic–thermodynamic sea ice, and an energy–moisture-balanced atmosphere. A major feature of version 3 is the flexible <mat...

Full description

Bibliographic Details
Published in:Geoscientific Model Development
Main Authors: K. Matsumoto, T. Tanioka, J. Zahn
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Publications 2021
Subjects:
Online Access:https://doi.org/10.5194/gmd-14-2265-2021
https://doaj.org/article/d6657e16b30e4686b57bad4a1eb32994
Description
Summary:We describe the third version of Minnesota Earth System Model for Ocean biogeochemistry (MESMO 3), an Earth system model of intermediate complexity, with a dynamical ocean, dynamic–thermodynamic sea ice, and an energy–moisture-balanced atmosphere. A major feature of version 3 is the flexible <math xmlns="http://www.w3.org/1998/Math/MathML" id="M1" display="inline" overflow="scroll" dspmath="mathml"><mrow class="chem"><mi mathvariant="normal">C</mi><mo>:</mo><mi mathvariant="normal">N</mi><mo>:</mo><mi mathvariant="normal">P</mi></mrow></math> <svg:svg xmlns:svg="http://www.w3.org/2000/svg" width="41pt" height="10pt" class="svg-formula" dspmath="mathimg" md5hash="89baeb1bef20dd832e5430c0fb7046a4"><svg:image xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="gmd-14-2265-2021-ie00001.svg" width="41pt" height="10pt" src="gmd-14-2265-2021-ie00001.png"/></svg:svg> ratio for the three phytoplankton functional types represented in the model. The flexible stoichiometry is based on the power law formulation with environmental dependence on phosphate, nitrate, temperature, and light. Other new features include nitrogen fixation, water column denitrification, oxygen and temperature-dependent organic matter remineralization, and CaCO 3 production based on the concept of the residual nitrate potential growth. In addition, we describe the semi-labile and refractory dissolved organic pools of C, N, P, and Fe that can be enabled in MESMO 3 as an optional feature. The refractory dissolved organic matter can be degraded by photodegradation at the surface and hydrothermal vent degradation at the bottom. These improvements provide a basis for using MESMO 3 in further investigations of the global marine carbon cycle to changes in the environmental conditions of the past, present, and future.