The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia

Abstract Background Increases in ocean temperatures and in the frequency and severity of hypoxic events are expected with climate change, and may become a challenge for cultured Atlantic salmon and negatively affect their growth, immunology and welfare. Thus, we examined how an incremental temperatu...

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Main Authors: Beemelmanns, Anne, Zanuzzo, Fábio S., Xue, Xi, Rebeccah M. Sandrelli, Rise, Matthew L., A. Kurt Gamperl
Format: Article in Journal/Newspaper
Language:unknown
Published: figshare 2021
Subjects:
Genetics
FOS Biological sciences
Atlantic salmon
Salmo salar
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.5373431
https://springernature.figshare.com/collections/The_transcriptomic_responses_of_Atlantic_salmon_Salmo_salar_to_high_temperature_stress_alone_and_in_combination_with_moderate_hypoxia/5373431
id ftdatacite:10.6084/m9.figshare.c.5373431
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.c.5373431 2023-05-15T15:30:27+02:00 The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia Beemelmanns, Anne Zanuzzo, Fábio S. Xue, Xi Rebeccah M. Sandrelli Rise, Matthew L. A. Kurt Gamperl 2021 https://dx.doi.org/10.6084/m9.figshare.c.5373431 https://springernature.figshare.com/collections/The_transcriptomic_responses_of_Atlantic_salmon_Salmo_salar_to_high_temperature_stress_alone_and_in_combination_with_moderate_hypoxia/5373431 unknown figshare https://dx.doi.org/10.1186/s12864-021-07464-x Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Genetics FOS Biological sciences Collection article 2021 ftdatacite https://doi.org/10.6084/m9.figshare.c.5373431 https://doi.org/10.1186/s12864-021-07464-x 2021-11-05T12:55:41Z Abstract Background Increases in ocean temperatures and in the frequency and severity of hypoxic events are expected with climate change, and may become a challenge for cultured Atlantic salmon and negatively affect their growth, immunology and welfare. Thus, we examined how an incremental temperature increase alone (Warm & Normoxic-WN: 12 → 20 °C; 1 °C week− 1), and in combination with moderate hypoxia (Warm & Hypoxic-WH: ~ 70% air saturation), impacted the salmon’s hepatic transcriptome expr\ession compared to control fish (CT: 12 °C, normoxic) using 44 K microarrays and qPCR. Results Overall, we identified 2894 differentially expressed probes (DEPs, FDR Article in Journal/Newspaper Atlantic salmon Salmo salar DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Genetics
FOS Biological sciences
spellingShingle Genetics
FOS Biological sciences
Beemelmanns, Anne
Zanuzzo, Fábio S.
Xue, Xi
Rebeccah M. Sandrelli
Rise, Matthew L.
A. Kurt Gamperl
The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
topic_facet Genetics
FOS Biological sciences
description Abstract Background Increases in ocean temperatures and in the frequency and severity of hypoxic events are expected with climate change, and may become a challenge for cultured Atlantic salmon and negatively affect their growth, immunology and welfare. Thus, we examined how an incremental temperature increase alone (Warm & Normoxic-WN: 12 → 20 °C; 1 °C week− 1), and in combination with moderate hypoxia (Warm & Hypoxic-WH: ~ 70% air saturation), impacted the salmon’s hepatic transcriptome expr\ession compared to control fish (CT: 12 °C, normoxic) using 44 K microarrays and qPCR. Results Overall, we identified 2894 differentially expressed probes (DEPs, FDR
format Article in Journal/Newspaper
author Beemelmanns, Anne
Zanuzzo, Fábio S.
Xue, Xi
Rebeccah M. Sandrelli
Rise, Matthew L.
A. Kurt Gamperl
author_facet Beemelmanns, Anne
Zanuzzo, Fábio S.
Xue, Xi
Rebeccah M. Sandrelli
Rise, Matthew L.
A. Kurt Gamperl
author_sort Beemelmanns, Anne
title The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_short The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_full The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_fullStr The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_full_unstemmed The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_sort transcriptomic responses of atlantic salmon (salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
publisher figshare
publishDate 2021
url https://dx.doi.org/10.6084/m9.figshare.c.5373431
https://springernature.figshare.com/collections/The_transcriptomic_responses_of_Atlantic_salmon_Salmo_salar_to_high_temperature_stress_alone_and_in_combination_with_moderate_hypoxia/5373431
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://dx.doi.org/10.1186/s12864-021-07464-x
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.c.5373431
https://doi.org/10.1186/s12864-021-07464-x
_version_ 1766360900968644608

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