Transcriptome-wide analyses indicate mitochondrial responses to particulate air pollution exposure

• Main Authors: Winckelmans, Ellen, Nawrot, Tim, Tsamou, Maria, Hond, Elly Den, Baeyens, Willy, Kleinjans, Jos, Lefebvre, Wouter, Larebeke, Nicolas Van, Peusens, Martien, Plusquin, Michelle, Reynders, Hans, Schoeters, Greet, Vanpoucke, Charlotte, Kok, Theo De, Vrijens, Karen
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: Figshare 2017
• Subjects: Biochemistry; Microbiology; FOS Biological sciences; Cell Biology; Genetics; Molecular Biology; 59999 Environmental Sciences not elsewhere classified; FOS Earth and related environmental sciences; Immunology; FOS Clinical medicine; 69999 Biological Sciences not elsewhere classified; Cancer; Carbonic acid
• Online Access: https://dx.doi.org/10.6084/m9.figshare.c.3857953.v1; https://figshare.com/collections/Transcriptome-wide_analyses_indicate_mitochondrial_responses_to_particulate_air_pollution_exposure/3857953/1

Abstract Background Due to their lack of repair capacity mitochondria are critical targets for environmental toxicants. We studied genes and pathways reflecting mitochondrial responses to short- and medium-term PM10 exposure. Methods Whole genome gene expression was measured in peripheral blood of 98 adults (49% women). We performed linear regression analyses stratified by sex and adjusted for individual and temporal characteristics to investigate alterations in gene expression induced by short-term (week before blood sampling) and medium-term (month before blood sampling) PM10 exposure. Overrepresentation analyses (ConsensusPathDB) were performed to identify enriched mitochondrial associated pathways and gene ontology sets. Thirteen Human MitoCarta genes were measured by means of quantitative real-time polymerase chain reaction (qPCR) along with mitochondrial DNA (mtDNA) content in an independent validation cohort (n = 169, 55.6% women). Results Overrepresentation analyses revealed significant pathways (p-value <0.05) related to mitochondrial genome maintenance and apoptosis for short-term exposure and to the electron transport chain (ETC) for medium-term exposure in women. For men, medium-term PM10 exposure was associated with the Tri Carbonic Acid cycle. In an independent study population, we validated several ETC genes, including UQCRH and COX7C (q-value <0.05), and some genes crucial for the maintenance of the mitochondrial genome, including LONP1 (q-value: 0.07) and POLG (q-value: 0.04) in women. Conclusions In this exploratory study, we identified mitochondrial genes and pathways associated with particulate air pollution indicating upregulation of energy producing pathways as a potential mechanism to compensate for PM-induced mitochondrial damage.