Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles

Comparative dating tree for the CYP26 subfamily. Divergence dates of the CYP26 sequences were estimated using fossil-based calibration intervals. Cladogram node dates represent estimation of the mean node height and the highest posterior density intervals fixed at 95% are shown in parentheses. Geolo...

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Main Authors: JoĂŁo Carvalho, Theodosiou, Maria, Chen, Jie, Chevret, Pascale, Alvarez, Susana, Lera, Angel De, Laudet, Vincent, Croce, Jenifer, Schubert, Michael
Format: Report
Language:unknown
Published: Figshare 2017
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.c.3669937_d7.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_3_of_Lineage-specific_duplication_of_amphioxus_retinoic_acid_degrading_enzymes_CYP26_resulted_in_sub-functionalization_of_patterning_and_homeostatic_roles/4568917/1
id ftdatacite:10.6084/m9.figshare.c.3669937_d7.v1
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spelling ftdatacite:10.6084/m9.figshare.c.3669937_d7.v1 2023-05-15T15:58:44+02:00 Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles JoĂŁo Carvalho Theodosiou, Maria Chen, Jie Chevret, Pascale Alvarez, Susana Lera, Angel De Laudet, Vincent Croce, Jenifer Schubert, Michael 2017 https://dx.doi.org/10.6084/m9.figshare.c.3669937_d7.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_3_of_Lineage-specific_duplication_of_amphioxus_retinoic_acid_degrading_enzymes_CYP26_resulted_in_sub-functionalization_of_patterning_and_homeostatic_roles/4568917/1 unknown Figshare https://dx.doi.org/10.1186/s12862-016-0863-1 https://dx.doi.org/10.6084/m9.figshare.c.3669937_d7 CC BY + CC0 https://creativecommons.org/licenses/by/4.0 CC0 Evolutionary Biology FOS Biological sciences 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences 39999 Chemical Sciences not elsewhere classified FOS Chemical sciences 69999 Biological Sciences not elsewhere classified Inorganic Chemistry Paper Text article-journal ScholarlyArticle 2017 ftdatacite https://doi.org/10.6084/m9.figshare.c.3669937_d7.v1 https://doi.org/10.1186/s12862-016-0863-1 https://doi.org/10.6084/m9.figshare.c.3669937_d7 2021-11-05T12:55:41Z Comparative dating tree for the CYP26 subfamily. Divergence dates of the CYP26 sequences were estimated using fossil-based calibration intervals. Cladogram node dates represent estimation of the mean node height and the highest posterior density intervals fixed at 95% are shown in parentheses. Geological era abbreviations: Cam, Cambrian; Car, Carboniferous; Cre, Cretaceous; Dev, Devonian; Jur, Jurassic; Ord, Ordovician; Per, Permian; Sil, Silurian; Tri, Triassic. Species name abbreviations: B.b., Branchiostoma belcheri (in blue); B.f., Branchiostoma floridae (in red); B.l., Branchiostoma lanceolatum (in green); C.g., Crassostrea gigas; C.i., Ciona intestinalis; C.m., Callorhinchus milii; C.t., Capitella teleta; D.r., Danio rerio; G.a., Gasterosteus aculeatus; G.g., Gallus gallus; H.s., Homo sapiens; L.a. Lingula anatina; L.c., Latimeria chalumnae; L.e., Leucoraja erinacea; L.g., Lottia gigantea; L.j., Lethenteron japonicum; L.o., Lepisosteus oculatus; M.d., Monodelphis domestica; M.m., Mus musculus; O.b., Octopus bimaculoides; O.l., Oryzias latipes; P.c., Priapulus caudatus; P.f., Ptychodera flava; P.m., Petromyzon marinus; S.k., Saccoglossus kowalevskii; S.p., Strongylocentrotus purpuratus; T.r., Takifugu rubripes; X.t., Xenopus tropicalis. (PDF 271 kb) Report Crassostrea gigas DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Evolutionary Biology
FOS Biological sciences
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
spellingShingle Evolutionary Biology
FOS Biological sciences
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
JoĂŁo Carvalho
Theodosiou, Maria
Chen, Jie
Chevret, Pascale
Alvarez, Susana
Lera, Angel De
Laudet, Vincent
Croce, Jenifer
Schubert, Michael
Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles
topic_facet Evolutionary Biology
FOS Biological sciences
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
39999 Chemical Sciences not elsewhere classified
FOS Chemical sciences
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
description Comparative dating tree for the CYP26 subfamily. Divergence dates of the CYP26 sequences were estimated using fossil-based calibration intervals. Cladogram node dates represent estimation of the mean node height and the highest posterior density intervals fixed at 95% are shown in parentheses. Geological era abbreviations: Cam, Cambrian; Car, Carboniferous; Cre, Cretaceous; Dev, Devonian; Jur, Jurassic; Ord, Ordovician; Per, Permian; Sil, Silurian; Tri, Triassic. Species name abbreviations: B.b., Branchiostoma belcheri (in blue); B.f., Branchiostoma floridae (in red); B.l., Branchiostoma lanceolatum (in green); C.g., Crassostrea gigas; C.i., Ciona intestinalis; C.m., Callorhinchus milii; C.t., Capitella teleta; D.r., Danio rerio; G.a., Gasterosteus aculeatus; G.g., Gallus gallus; H.s., Homo sapiens; L.a. Lingula anatina; L.c., Latimeria chalumnae; L.e., Leucoraja erinacea; L.g., Lottia gigantea; L.j., Lethenteron japonicum; L.o., Lepisosteus oculatus; M.d., Monodelphis domestica; M.m., Mus musculus; O.b., Octopus bimaculoides; O.l., Oryzias latipes; P.c., Priapulus caudatus; P.f., Ptychodera flava; P.m., Petromyzon marinus; S.k., Saccoglossus kowalevskii; S.p., Strongylocentrotus purpuratus; T.r., Takifugu rubripes; X.t., Xenopus tropicalis. (PDF 271 kb)
format Report
author JoĂŁo Carvalho
Theodosiou, Maria
Chen, Jie
Chevret, Pascale
Alvarez, Susana
Lera, Angel De
Laudet, Vincent
Croce, Jenifer
Schubert, Michael
author_facet JoĂŁo Carvalho
Theodosiou, Maria
Chen, Jie
Chevret, Pascale
Alvarez, Susana
Lera, Angel De
Laudet, Vincent
Croce, Jenifer
Schubert, Michael
author_sort JoĂŁo Carvalho
title Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles
title_short Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles
title_full Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles
title_fullStr Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles
title_full_unstemmed Additional file 3: of Lineage-specific duplication of amphioxus retinoic acid degrading enzymes (CYP26) resulted in sub-functionalization of patterning and homeostatic roles
title_sort additional file 3: of lineage-specific duplication of amphioxus retinoic acid degrading enzymes (cyp26) resulted in sub-functionalization of patterning and homeostatic roles
publisher Figshare
publishDate 2017
url https://dx.doi.org/10.6084/m9.figshare.c.3669937_d7.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_3_of_Lineage-specific_duplication_of_amphioxus_retinoic_acid_degrading_enzymes_CYP26_resulted_in_sub-functionalization_of_patterning_and_homeostatic_roles/4568917/1
genre Crassostrea gigas
genre_facet Crassostrea gigas
op_relation https://dx.doi.org/10.1186/s12862-016-0863-1
https://dx.doi.org/10.6084/m9.figshare.c.3669937_d7
op_rights CC BY + CC0
https://creativecommons.org/licenses/by/4.0
op_rightsnorm CC0
op_doi https://doi.org/10.6084/m9.figshare.c.3669937_d7.v1
https://doi.org/10.1186/s12862-016-0863-1
https://doi.org/10.6084/m9.figshare.c.3669937_d7
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