Brown trout (Salmo trutta) RAD data set of 12204 sequences each containing one or two SNPs, with minimum allele frequency of 5% or higher, no SNPs in the first or last 30 bp of the RAD, no unsequenced nucleotides, and which can be positioned on the S. trutta linkage map

This file contains for each RAD, identification (Locus_ID ), chromosome on Atlantic Salmon CHROMsalar), linkage group on the Brown trout linkage map (LG_Trutta),Position on the brown trout linkage group (Pos_cM_Trutta), positions on the Atlantic salmon chromosome (POSsalar_snp1, POSsalar_snp2), posi...

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Bibliographic Details
Main Authors: Keoni Saint-Pé, Leitwein, Maeva, Tissot, Laurence, Poulet, Nicolas, Guinand, Bruno, Berrebi, Patrick, Marselli, Geoffrey, Jean-Marc Lascaux, Pierre-Alexandre Gagnaire, Blanchet Simon
Format: Article in Journal/Newspaper
Language:unknown
Published: Figshare 2019
Subjects:
Evolutionary Biology
FOS Biological sciences
60204 Freshwater Ecology
Genetics
60408 Genomics
Atlantic salmon
Online Access:https://dx.doi.org/10.6084/m9.figshare.8174708.v1
https://figshare.com/articles/Brown_trout_Salmo_trutta_RAD_data_set_of_12204_sequences_each_containing_one_or_two_SNPs_with_minimum_allele_frequency_of_5_or_higher_no_SNPs_in_the_first_or_last_30_bp_of_the_RAD_no_unsequenced_nucleotides_and_which_can_be_positioned_on_the_S_trutta_link/8174708/1
Description
Summary:This file contains for each RAD, identification (Locus_ID ), chromosome on Atlantic Salmon CHROMsalar), linkage group on the Brown trout linkage map (LG_Trutta),Position on the brown trout linkage group (Pos_cM_Trutta), positions on the Atlantic salmon chromosome (POSsalar_snp1, POSsalar_snp2), position of the SNP on the Rad tag (POStag_snp1, POStag_snp2), recombination rate ( recombination_rate_cM.Mb), sequence of the tag (TAG), sequencing direction (Orientation), and position of the rad (POS_RAD).

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