MSA nuclear receptors

Nuclear receptor sequences were identified in the Danio rerio and Gadus morhua proteomes (downloaded from ENSEMBL) by performing an HMM search (hmmer) with the Pfam profile for the ligand-binding domain of nuclear hormone receptor (PF00104). The identified sequences were aligned using ClustalX 2.1 w...

Full description

Bibliographic Details
Main Author: Puntervoll, Pål
Format: Dataset
Language:unknown
Published: figshare 2018
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.5752812
https://figshare.com/articles/MSA_nuclear_receptors/5752812
Description
Summary:Nuclear receptor sequences were identified in the Danio rerio and Gadus morhua proteomes (downloaded from ENSEMBL) by performing an HMM search (hmmer) with the Pfam profile for the ligand-binding domain of nuclear hormone receptor (PF00104). The identified sequences were aligned using ClustalX 2.1 with default parameters.