Additional file 1 of Decline of a distinct coral reef holobiont community under ocean acidification ...

• Main Authors: Williams, Jake, Pettorelli, Nathalie, Hartmann, Aaron C., Quinn, Robert A., Plaisance, Laetitia, O’Mahoney, Michael, Meyer, Chris P., Fabricius, Katharina E., Knowlton, Nancy, Ransome, Emma
• Format: Text
• Language: unknown
• Published: figshare 2024
• Subjects: Ecology; FOS: Biological sciences; Ocean acidification
• Online Access: https://dx.doi.org/10.6084/m9.figshare.26707199; https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Decline_of_a_distinct_coral_reef_holobiont_community_under_ocean_acidification/26707199

Additional file 1: Table S1. Number of sequences retained at each step of denoising (implemented in DADA2); samples with fewer than 50,000 denoised sequences (ASVs) and duplicate samples were removed prior to analysis. Table S2. Effect size and significance of factors in PERMANOVAs describing the compositional differences among sites, and along the pH gradient for all multiomic data types; site fit as a blocking factor, except in the case of Halisarca sp. sponge fractions, which were only collected at one site. A p-value less than 0.05 indicates that the factor significantly affects composition. Bonferroni correction was applied to all PERMANOVA. Table S3. ASV estimated richness betta mixed model: fixed effects listed, random effect of locality. Model Explanatory Power: test statistic = 117.2, p<0.05. A p-value less than 0.05 indicates that the explanatory variable significantly affects ASV richness. All values in the table are reported to two significant figures. Table S4. Phylum Shannon diversity betta ...