Additional file 1 of Effects of dietary supplementation with prebiotics and Pediococcus acidilactici on gut health, transcriptome, microbiota, and metabolome in Atlantic salmon (Salmo salar L.) after seawater transfer ...

• Main Authors: Dhanasiri, Anusha K. S., Jaramillo-Torres, Alexander, Chikwati, Elvis M., Forberg, Torunn, Krogdahl, Åshild, Kortner, Trond M.
• Format: Text
• Language: unknown
• Published: figshare 2024
• Subjects: Biochemistry; Microbiology; FOS: Biological sciences; Genetics; Physiology; Biotechnology; Chemical Sciences not elsewhere classified; Ecology; Inorganic Chemistry; FOS: Chemical sciences; Atlantic salmon; Salmo salar
• Online Access: https://dx.doi.org/10.6084/m9.figshare.26567950.v1; https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Effects_of_dietary_supplementation_with_prebiotics_and_Pediococcus_acidilactici_on_gut_health_transcriptome_microbiota_and_metabolome_in_Atlantic_salmon_Salmo_salar_L_after_seawater_transfer/26567950/1

Additional file 1. Figure S1. The absolute bacterial DNA levels quantified by qPCR. DNA levels in digesta samples (a) and mucosa samples (b) from each of the treatments. n = 8 fish per group. Error bars represent SEM. No significant differences (p ≤ 0.05) found among the treatments. Figure S2. The alpha diversity indices for digesta and mucosa at ASV level. Observed ASVs (a) and Shannon indices (b) for digesta and observed ASVs (c) and Shannon indices (d) for mucosa. p values obtained from Kruskal–Wallis analysis among the feed groups are presented above each graph. Each box plot contains 25% and 75% quartiles of the data set respectively at the lower and upper ends of the box. The vertical line inside the box indicates the median, and the ends of the whiskers indicate minimum and maximum values of the data. Black rectangle indicates mean value of the data and dots display values from individual fish. Figure S3. Top 10 most abundant phyla of digesta (a) and mucosa (b) from distal intestine. The samples are ...