Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...

Additional file 1: Supplementary Figures S1-S6. Figure S1. Representative images for mitochondrial staining after 0, 1, or 6 h hypoxia exposure followed by 30 min reoxygenation. Upper: seal. Lower: human. MitoTracker Red CMXRos (red). Hoescht (blue). Scale bar is 50 µm. Figure S2. Uncropped western...

Full description

Bibliographic Details
Main Authors: Allen, Kaitlin N., Torres-Velarde, Julia María, Vazquez, Juan Manuel, Moreno-Santillán, Diana D., Sudmant, Peter H., Vázquez-Medina, José Pablo
Format: Text
Language:unknown
Published: figshare 2024
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.25678610.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Hypoxia_exposure_blunts_angiogenic_signaling_and_upregulates_the_antioxidant_system_in_endothelial_cells_derived_from_elephant_seals/25678610/1
id ftdatacite:10.6084/m9.figshare.25678610.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.25678610.v1 2024-09-30T14:34:24+00:00 Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ... Allen, Kaitlin N. Torres-Velarde, Julia María Vazquez, Juan Manuel Moreno-Santillán, Diana D. Sudmant, Peter H. Vázquez-Medina, José Pablo 2024 https://dx.doi.org/10.6084/m9.figshare.25678610.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Hypoxia_exposure_blunts_angiogenic_signaling_and_upregulates_the_antioxidant_system_in_endothelial_cells_derived_from_elephant_seals/25678610/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.25678610 https://dx.doi.org/10.1152/ajpregu.00247.2009 https://dx.doi.org/10.1371/journal.pone.0083248 https://dx.doi.org/10.1016/0034-5687(70)90077-0 https://dx.doi.org/10.1016/0034-5687(73)90077-7 https://dx.doi.org/10.1097/00075198-200206000-00008 https://dx.doi.org/10.3390/biom11070982 https://dx.doi.org/10.1038/s41392-022-01080-1 https://dx.doi.org/10.1139/y93-011 https://dx.doi.org/10.1007/s00424-017-1935-9 https://dx.doi.org/10.1016/j.cmet.2015.12.009 https://dx.doi.org/10.1038/nature13909 https://dx.doi.org/10.1242/jeb.245516 https://dx.doi.org/10.1016/j.vph.2017.05.005 https://dx.doi.org/10.1152/jappl.1979.47.5.968 https://dx.doi.org/10.1152/ajpregu.00283.2018 https://dx.doi.org/10.1242/jeb.182972 https://dx.doi.org/10.1242/jeb.178491 https://dx.doi.org/10.1242/jeb.057935 https://dx.doi.org/10.1016/j.cbpc.2005.09.004 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Genetics FOS: Biological sciences Text ScholarlyArticle article-journal Journal contribution 2024 ftdatacite https://doi.org/10.6084/m9.figshare.25678610.v110.6084/m9.figshare.2567861010.1152/ajpregu.00247.200910.1371/journal.pone.008324810.1016/0034-5687(70)90077-010.1016/0034-5687(73)90077-710.1097/00075198-200206000-0000810.3390/biom1107098210.1038/s41392-022 2024-09-02T08:51:34Z Additional file 1: Supplementary Figures S1-S6. Figure S1. Representative images for mitochondrial staining after 0, 1, or 6 h hypoxia exposure followed by 30 min reoxygenation. Upper: seal. Lower: human. MitoTracker Red CMXRos (red). Hoescht (blue). Scale bar is 50 µm. Figure S2. Uncropped western blots. (A) HIF-1α. (B) β-actin. Figure S3. Raw gap area for all species and conditions during scratch assay. Figure S4. Total within cluster sum of squares for clustering results from k=1...30). Upper: seal. Lower: human. Diminishing returns were observed after 6 clusters thus k=6 (pink) was selected as the optimal clustering. Figure S5. k-means clustering and KEGG pathway enrichment for human cells. k-means clustering of gene expression data for human cells exposed to 1% O2 for up to 6 h. (B) KEGG pathway enrichment for human clusters. Numbers on the right axis correspond to human cluster numbers. Figure S6. Long-term hypoxia exposure modulates transcription and translation in human cells. (A) Reactome pathway ... Text Elephant Seals DataCite
institution Open Polar
collection DataCite
op_collection_id ftdatacite
language unknown
topic Genetics
FOS: Biological sciences
spellingShingle Genetics
FOS: Biological sciences
Allen, Kaitlin N.
Torres-Velarde, Julia María
Vazquez, Juan Manuel
Moreno-Santillán, Diana D.
Sudmant, Peter H.
Vázquez-Medina, José Pablo
Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...
topic_facet Genetics
FOS: Biological sciences
description Additional file 1: Supplementary Figures S1-S6. Figure S1. Representative images for mitochondrial staining after 0, 1, or 6 h hypoxia exposure followed by 30 min reoxygenation. Upper: seal. Lower: human. MitoTracker Red CMXRos (red). Hoescht (blue). Scale bar is 50 µm. Figure S2. Uncropped western blots. (A) HIF-1α. (B) β-actin. Figure S3. Raw gap area for all species and conditions during scratch assay. Figure S4. Total within cluster sum of squares for clustering results from k=1...30). Upper: seal. Lower: human. Diminishing returns were observed after 6 clusters thus k=6 (pink) was selected as the optimal clustering. Figure S5. k-means clustering and KEGG pathway enrichment for human cells. k-means clustering of gene expression data for human cells exposed to 1% O2 for up to 6 h. (B) KEGG pathway enrichment for human clusters. Numbers on the right axis correspond to human cluster numbers. Figure S6. Long-term hypoxia exposure modulates transcription and translation in human cells. (A) Reactome pathway ...
format Text
author Allen, Kaitlin N.
Torres-Velarde, Julia María
Vazquez, Juan Manuel
Moreno-Santillán, Diana D.
Sudmant, Peter H.
Vázquez-Medina, José Pablo
author_facet Allen, Kaitlin N.
Torres-Velarde, Julia María
Vazquez, Juan Manuel
Moreno-Santillán, Diana D.
Sudmant, Peter H.
Vázquez-Medina, José Pablo
author_sort Allen, Kaitlin N.
title Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...
title_short Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...
title_full Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...
title_fullStr Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...
title_full_unstemmed Additional file 1 of Hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...
title_sort additional file 1 of hypoxia exposure blunts angiogenic signaling and upregulates the antioxidant system in endothelial cells derived from elephant seals ...
publisher figshare
publishDate 2024
url https://dx.doi.org/10.6084/m9.figshare.25678610.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Hypoxia_exposure_blunts_angiogenic_signaling_and_upregulates_the_antioxidant_system_in_endothelial_cells_derived_from_elephant_seals/25678610/1
genre Elephant Seals
genre_facet Elephant Seals
op_relation https://dx.doi.org/10.6084/m9.figshare.25678610
https://dx.doi.org/10.1152/ajpregu.00247.2009
https://dx.doi.org/10.1371/journal.pone.0083248
https://dx.doi.org/10.1016/0034-5687(70)90077-0
https://dx.doi.org/10.1016/0034-5687(73)90077-7
https://dx.doi.org/10.1097/00075198-200206000-00008
https://dx.doi.org/10.3390/biom11070982
https://dx.doi.org/10.1038/s41392-022-01080-1
https://dx.doi.org/10.1139/y93-011
https://dx.doi.org/10.1007/s00424-017-1935-9
https://dx.doi.org/10.1016/j.cmet.2015.12.009
https://dx.doi.org/10.1038/nature13909
https://dx.doi.org/10.1242/jeb.245516
https://dx.doi.org/10.1016/j.vph.2017.05.005
https://dx.doi.org/10.1152/jappl.1979.47.5.968
https://dx.doi.org/10.1152/ajpregu.00283.2018
https://dx.doi.org/10.1242/jeb.182972
https://dx.doi.org/10.1242/jeb.178491
https://dx.doi.org/10.1242/jeb.057935
https://dx.doi.org/10.1016/j.cbpc.2005.09.004
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.6084/m9.figshare.25678610.v110.6084/m9.figshare.2567861010.1152/ajpregu.00247.200910.1371/journal.pone.008324810.1016/0034-5687(70)90077-010.1016/0034-5687(73)90077-710.1097/00075198-200206000-0000810.3390/biom1107098210.1038/s41392-022
_version_ 1811638033981636608