Additional file 1 of Metagenome-assembled genomes reveal greatly expanded taxonomic and functional diversification of the abundant marine Roseobacter RCA cluster ...

• Main Authors: Liu, Yanting, Brinkhoff, Thorsten, Berger, Martine, Poehlein, Anja, Voget, Sonja, Paoli, Lucas, Sunagawa, Shinichi, Amann, Rudolf, Simon, Meinhard
• Format: Dataset
• Language: unknown
• Published: figshare 2023
• Subjects: Genetics; FOS Biological sciences; Evolutionary Biology; Southern Ocean
• Online Access: https://dx.doi.org/10.6084/m9.figshare.24634512.v1; https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Metagenome-assembled_genomes_reveal_greatly_expanded_taxonomic_and_functional_diversification_of_the_abundant_marine_Roseobacter_RCA_cluster/24634512/1

Additional file 1: Supplementary text S1. Table S1. Basic information of 154 MAGs of the RCA cluster. Table S2. Basic sequencing and genomic information of 87 analysed RCA MAGs/genomes (82 MAGs and 5 genomes from isolates) and locations where the metagenomic samples and isolates were collected. Table S3. Metadata for metagenomic data used to estimate the proportion of the RCA cluster and 10 of the 13 RCA species. Table S4. Metadata for metatranscriptomic data used to estimate the proportion of the RCA cluster and 10 of the 13 RCA species. Table S5. Genome data of Southern Ocean SAG [21]. Table S6. Annotation of genes encoded on PGC-containing extrachromosomal replicons of two Nereidia strains. Table S6. The incomplete prophage in the Rhodobacteraceae bacterium IMCC1909. Table S7. The GC content of genomes and PR genes in the RCA cluster. Table S8. Annotation of genes encoded on PGC-containing extrachromosomal replicons of two Nereidia strains. Figure S1. The variation of the genome size, GC content and CDS ...