Additional file 5 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean ...

Additional file 5: Supplementary Figure 5. Heatmap of shared KEGG transporter proteins. All metatranscriptomes are shown in triplicates. Zscaling of normalized transcript counts by rows and Euclidian clustering by row and column. The presence of proteins in metaproteomes is defined by their presence...

Full description

Bibliographic Details
Main Authors: Debeljak, Pavla, Bayer, Barbara, Sun, Ying, Herndl, Gerhard J., Obernosterer, Ingrid
Format: Text
Language:unknown
Published: figshare 2023
Subjects:
Microbiology
FOS Biological sciences
Oceanography
FOS Earth and related environmental sciences
Southern Ocean
Online Access:https://dx.doi.org/10.6084/m9.figshare.23993331
https://springernature.figshare.com/articles/journal_contribution/Additional_file_5_of_Seasonal_patterns_in_microbial_carbon_and_iron_transporter_expression_in_the_Southern_Ocean/23993331
Description
Summary:Additional file 5: Supplementary Figure 5. Heatmap of shared KEGG transporter proteins. All metatranscriptomes are shown in triplicates. Zscaling of normalized transcript counts by rows and Euclidian clustering by row and column. The presence of proteins in metaproteomes is defined by their presence in one duplicate. Transporter types are indicated by different colors: ABC – ATP-binding cassette transporter complex, AMT/NPP – Ammonium Channel Transporter/Nitrate, Nitrate Porter, CUT – Carbohydrate Uptake Transporter, OMP – Outer Membrane Protein, OMR – Outer Membrane Receptor, SSS – Solute Sodium Symporter, TRAP-T - Tripartite ATP-independent periplasmic transporters, TTT – Tripartite Tricarboxylate Transporter. ...

Similar Items