Additional file 1 of Chromosome-level assembly of the Rangifer tarandus genome and validation of cervid and bovid evolution insights ...

Additional file 1. Information on 79-mers used for chromosome-level assembly. These Excel files list each oligo with its unique ID and associated probe on a scaffold. The 39-mers genome homologous sequences obtained from running OligoMiner and IFPD scripts are also given with their start and end pos...

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Bibliographic Details
Main Authors: Poisson, William, Prunier, Julien, Carrier, Alexandra, Gilbert, Isabelle, Mastromonaco, Gabriela, Albert, Vicky, Taillon, Joëlle, Bourret, Vincent, Droit, Arnaud, Côté, Steeve D., Robert, Claude
Format: Dataset
Language:unknown
Published: figshare 2023
Subjects:
Genetics
FOS Biological sciences
Rangifer tarandus
Online Access:https://dx.doi.org/10.6084/m9.figshare.22621939.v1
https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Chromosome-level_assembly_of_the_Rangifer_tarandus_genome_and_validation_of_cervid_and_bovid_evolution_insights/22621939/1
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Summary:Additional file 1. Information on 79-mers used for chromosome-level assembly. These Excel files list each oligo with its unique ID and associated probe on a scaffold. The 39-mers genome homologous sequences obtained from running OligoMiner and IFPD scripts are also given with their start and end positions on the scaffold sequence. R_id and F_id are based on 20-mers ID attribution (Additional file 2). The reverse and forward specific 20-mers sequences were assigned according to scaffold number and colour pattern respectively. Each 20-mers forward sequence bears a unique fluorophore (Fluorophore column). Assembled 79-mers oligo sequences were purchased from Genscript. ...

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