Figure 1 | Comparing Toll-like Receptor 5 (TLR5) Domains Using HMMER
Figure 1 | Comparing Toll-like Receptor 5 (TLR5) Domains using HMMER HMMER - EMBL - EBI results for TLR5, soluble TLR5 (sTLR5), and potentially soluble forms of TLR5 ((s)TLR5) for the following species: S almo salar, Salmo trutta, Oncorhynchus tshawytscha, Oncorhynchus kisutch, Hucho hucho, Homo sap...
| Main Authors: | , , , |
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| Format: | Still Image |
| Language: | unknown |
| Published: |
figshare
2022
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| Subjects: | |
| Online Access: | https://dx.doi.org/10.6084/m9.figshare.19329974.v1 https://figshare.com/articles/figure/Figure_1_Comparing_Toll-like_Receptor_5_TLR5_Domains_Using_HMMER/19329974/1 |
| Summary: | Figure 1 | Comparing Toll-like Receptor 5 (TLR5) Domains using HMMER HMMER - EMBL - EBI results for TLR5, soluble TLR5 (sTLR5), and potentially soluble forms of TLR5 ((s)TLR5) for the following species: S almo salar, Salmo trutta, Oncorhynchus tshawytscha, Oncorhynchus kisutch, Hucho hucho, Homo sapiens , Esox lucius, Oncorhynchus mykiss, Delphinapterus leucas . Protein translation of CDS sequences (See Complete Aligned multi-FASTA of Toll-like Receptor 5 (TLR5) CDS) was created using MUSCLE in AliView. Protein translation CDS was then uploaded in FASTA format into HMMER. The HMMER analysis show two figures: Top - purple and red boxes represent leucine-rich repeat (LRR) domains and turquoise shapes represent Toll/interleukin-1 receptor (TIR) domains. Bottom - yellow squares represents the signal peptide and red squares represents the Transmembrane (TM) domain. a, (top) Salmo salar TLR5, (bottom) Salmo salar sTLR5. b, (top) Salmo trutta TLR5, (bottom) Salmo trutta (s)TLR5. c, (top) Oncorhynchus tshawytscha TLR5, (bottom) Oncorhynchus tshawytscha (s)TLR5. d, (top) Esox lucius , (bottom) Esox lucius (s)TLR5. e, (top) Oncorhynchus mykiss TLR5, (bottom) Oncorhynchus mykiss sTLR5. f, (top) Oncorhynchus kisutch TLR5, (bottom) Oncorhynchus kisutch (s)TLR5. |
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