Additional file 6 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities

Additional file 5: Table S4. OTUs prevalence analysis by sub-setting full dataset into multiple core OTUs. The table summarises the number OTUs within each subset dataset (subset by the % of samples that share OTUs) and percentage of the total number of OTUs within the full dataset (100%). This tabl...

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Bibliographic Details
Main Authors: Kazlauskaite, Raminta, Cheaib, Bachar, Heys, Chloe, Ijaz, Umer Zeeshan, Connelly, Stephanie, Sloan, William, Russel, Julie, Rubio, Laura, Sweetman, John, Kitts, Alex, McGinnity, Philip, Lyons, Philip, Llewellyn, Martin
Format: Dataset
Language:unknown
Published: figshare 2021
Subjects:
Microbiology
FOS Biological sciences
Genetics
Atlantic salmon
Online Access:https://dx.doi.org/10.6084/m9.figshare.16551234.v1
https://springernature.figshare.com/articles/dataset/Additional_file_6_of_SalmoSim_the_development_of_a_three-compartment_in_vitro_simulator_of_the_Atlantic_salmon_GI_tract_and_associated_microbial_communities/16551234/1
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Summary:Additional file 5: Table S4. OTUs prevalence analysis by sub-setting full dataset into multiple core OTUs. The table summarises the number OTUs within each subset dataset (subset by the % of samples that share OTUs) and percentage of the total number of OTUs within the full dataset (100%). This table also shows the number of reads and the percentage of total reads (100%) within each of the subset datasets. Note: in the 60% subset three samples were lost as they did not retain any under that criteria OTUs: Id-val1-PC1, Id-Val2-MG4 and Id-Val2-PC1.

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