Figure1 - WholeGenomeSequencingAtlanticPuffin(71)

Files needed to recreate Figure 1 in the publication - Kersten et al. 2021 - DOI: 10.1038/s42003-021-02415-4 (https://www.biorxiv.org/content/10.1101/2020.11.05.351874v2.full) 1. Covariance matrix of 71 Atlantic puffin nuclear genomes (output from PCAngsd). 2. Q-matrices of 71 Atlantic puffin nuclea...

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Bibliographic Details
Main Author: Kersten, Oliver
Format: Dataset
Language:unknown
Published: figshare 2021
Subjects:
60408 Genomics
FOS Biological sciences
60411 Population, Ecological and Evolutionary Genetics
Atlantic puffin
Online Access:https://dx.doi.org/10.6084/m9.figshare.14743242.v1
https://figshare.com/articles/dataset/Figure1_-_WholeGenomeSequencingAtlanticPuffin_71_/14743242/1
Description
Summary:Files needed to recreate Figure 1 in the publication - Kersten et al. 2021 - DOI: 10.1038/s42003-021-02415-4 (https://www.biorxiv.org/content/10.1101/2020.11.05.351874v2.full) 1. Covariance matrix of 71 Atlantic puffin nuclear genomes (output from PCAngsd). 2. Q-matrices of 71 Atlantic puffin nuclear genomes (output from CLUMPAK after ngsAdmix). 3. Nexus file as input for Fitchi for the haplotype network. (71 Atlantic puffin mitochondrial genomes) 4. Coordinates of sample locations (for map). Detailed methods can be found in the manuscript.

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