R scripts and data for SIBER analysis of Benthic trophic interactions and glacier retreat
R scripts for SIBER analysis and Graphs These are the R and Rmd (R markdown) scripts used in the paper: Pasotti F, Saravia LA, De Troch M, Tarantelli MS, Sahade R, Vanreusel A. Benthic trophic interactions in an Antarctic shallow water ecosystem affected by recent glacier retreat . PLoS One. 2015;10...
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| Format: | Dataset |
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figshare
2015
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| Online Access: | https://dx.doi.org/10.6084/m9.figshare.1094784.v6 https://figshare.com/articles/dataset/R_scripts_for_SIBER_analysis_of_benthic_Antarctic_shallow_water_ecosystem_affected_by_glacier_retreat/1094784/6 |
| Summary: | R scripts for SIBER analysis and Graphs These are the R and Rmd (R markdown) scripts used in the paper: Pasotti F, Saravia LA, De Troch M, Tarantelli MS, Sahade R, Vanreusel A. Benthic trophic interactions in an Antarctic shallow water ecosystem affected by recent glacier retreat . PLoS One. 2015;10: e0141742. doi:10.1371/journal. pone.0141742 Description of main files: Siber.Rmd: R markdown file used for the analysis and figures of the complete original data. Siber_wout_MT2-poly.Rmd: Small modifications to analyze a data set without some outliers of the same data. Pasotti.dat: original data used in the analysis Accesory files: BUGS_models.r/SEA_fitting.r: updated functions for SIBER analysis not included in the package Test simul_ln_iso_data.r: generation of simulated data pasottiSim.dat: Simulated data Siber_w_sim_data.Rmd: sligtly modified R script to run with simulated data |
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